Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G342900.1 | Wheat | cytosol | 44.31 | 96.1 |
| TraesCS7B01G247000.1 | Wheat | cytosol | 44.31 | 96.1 |
| Os08t0205400-01 | Rice | extracellular, plasma membrane | 41.32 | 85.19 |
| Bra029854.1-P | Field mustard | cytosol, plastid | 37.13 | 81.58 |
| CDY00957 | Canola | cytosol, plastid | 37.13 | 81.58 |
| CDY08589 | Canola | cytosol, plastid | 37.13 | 81.58 |
| Zm00001d031132_P002 | Maize | cytosol | 37.13 | 73.81 |
| EES17440 | Sorghum | cytosol, plastid | 38.32 | 73.56 |
| PGSC0003DMT400060399 | Potato | cytosol, plastid | 35.33 | 72.84 |
| Solyc05g055310.2.1 | Tomato | plastid | 35.33 | 72.84 |
| VIT_13s0074g00770.t01 | Wine grape | cytosol | 36.53 | 70.93 |
| AT1G66240.1 | Thale cress | cytosol, plastid | 40.12 | 63.21 |
| PGSC0003DMT400050141 | Potato | cytosol, plastid | 35.33 | 55.66 |
| GSMUA_Achr6P07500_001 | Banana | cytosol, plastid | 37.13 | 55.36 |
| Solyc11g007200.1.1 | Tomato | extracellular | 34.13 | 50.44 |
| TraesCS7A01G439300.1 | Wheat | cytosol | 31.74 | 48.18 |
| TraesCS3A01G288300.1 | Wheat | cytosol | 20.96 | 24.48 |
| TraesCS1A01G352100.1 | Wheat | mitochondrion | 20.36 | 22.97 |
| TraesCS5A01G475200.1 | Wheat | plastid | 19.16 | 15.31 |
| TraesCS1A01G283600.1 | Wheat | cytosol | 16.77 | 15.05 |
| TraesCS3A01G526400.1 | Wheat | cytosol, mitochondrion, plastid | 22.75 | 12.5 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G335400.1 | EnsemblPlantsGene:TraesCS7A01G335400 | Gene3D:3.30.70.100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 |
| PANTHER:PTHR22814 | PANTHER:PTHR22814:SF172 | PFAM:PF00403 | PFscan:PS50846 | SEG:seg | SUPFAM:SSF55008 |
| TIGR:cd00371 | MapMan:25.5.2.3 | : | : | : | : |
Description
No Description!
Coordinates
chr7A:+:490864496..490866388
Molecular Weight (calculated)
17706.2 Da
IEP (calculated)
5.801
GRAVY (calculated)
-0.018
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MFGIPGSFDL FLRTNFLEEQ ASHVRDLSGG PADLFVRVTG DCAVCGFATG DVDSGERGPA RLVLVGRSGI ARAPGQLCKI EHFDWSQKVL GTVELRVGMS
101: CEGCVGAVKR VLGKMEGVES FDVDIKEQKV TVKGNVTPDA VLQTVSKTGK KTAFWEAEPS PASAVSS
101: CEGCVGAVKR VLGKMEGVES FDVDIKEQKV TVKGNVTPDA VLQTVSKTGK KTAFWEAEPS PASAVSS
001: MLKDLFQAVS YQNTASLSLF QALSVVESKA MSQTVVLRVA MTCEGCVGAV KRVLGKMEGV ESFDVDIKEQ KVTVKGNVQP DAVLQTVTKT GKKTAFWEAE
101: GETAKA
101: GETAKA
Arabidopsis Description
ATX1homolog of anti-oxidant 1 [Source:TAIR;Acc:AT1G66240]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.