Factsheet for TraesCS5A01G475200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G488200.1	Wheat	plastid	96.65	95.73
HORVU5Hr1G112560.1	Barley	plastid	90.43	91.3
Os03t0819400-01	Rice	plastid	73.21	75.37
Zm00001d034634_P001	Maize	plastid	69.38	69.05
Zm00001d012973_P001	Maize	plastid	68.9	68.25
EER90630	Sorghum	plastid	68.42	67.14
GSMUA_Achr4P30560_001	Banana	plastid	37.32	40.41
GSMUA_Achr7P15330_001	Banana	plastid	40.19	39.44
GSMUA_Achr6P34370_001	Banana	plastid	41.15	38.74
Zm00001d038419_P001	Maize	cytosol	41.15	37.89
GSMUA_Achr9P03120_001	Banana	plastid	39.71	37.39
GSMUA_Achr2P16130_001	Banana	mitochondrion, plastid	38.28	37.38
GSMUA_Achr10P...	Banana	cytosol, plastid	30.62	36.36
TraesCS1A01G352100.1	Wheat	mitochondrion	25.36	35.81
TraesCS3A01G288300.1	Wheat	cytosol	23.45	34.27
GSMUA_Achr7P10400_001	Banana	plastid	34.45	33.96
TraesCS7A01G439300.1	Wheat	cytosol	17.7	33.64
AT2G37390.1	Thale cress	cytosol	38.76	31.27
TraesCS3A01G526400.1	Wheat	cytosol, mitochondrion, plastid	44.98	30.92
VIT_08s0040g02700.t01	Wine grape	cytosol, plastid	39.71	30.74
CDY52751	Canola	cytosol	36.36	30.4
Bra003142.1-P	Field mustard	cytosol, plastid	35.89	30.12
CDY07583	Canola	cytosol	34.93	30.04
AT3G53530.2	Thale cress	cytosol, plastid	35.41	29.84
KRH19750	Soybean	plastid	39.23	29.71
CDX73547	Canola	cytosol, plastid	35.89	29.64
KRH32346	Soybean	plastid	39.71	29.64
CDY67353	Canola	cytosol, plastid	35.89	29.41
Bra007008.1-P	Field mustard	cytosol, plastid	35.41	29.02
KRH67578	Soybean	plastid	40.19	28.97
CDX93383	Canola	cytosol	36.84	28.95
CDX91358	Canola	cytosol	37.32	28.78
CDY18449	Canola	cytosol	36.84	28.73
TraesCS1A01G283600.1	Wheat	cytosol	25.36	28.49
CDX74966	Canola	cytosol	36.84	28.31
Bra017191.1-P	Field mustard	cytosol	35.89	28.3
KRG95861	Soybean	plastid	39.23	28.28
Solyc10g085910.1.1	Tomato	nucleus	39.23	27.61
Bra005201.1-P	Field mustard	cytosol	34.93	27.14
PGSC0003DMT400045359	Potato	cytosol	38.28	26.67
CDY68400	Canola	plastid	36.84	26.46
CDY04859	Canola	cytosol	34.93	23.93
AT5G02600.1	Thale cress	plastid	35.89	23.51
Bra028868.1-P	Field mustard	cytosol, plastid	31.1	22.49
CDY10437	Canola	cytosol, plastid	33.97	22.4
Bra009578.1-P	Field mustard	cytosol, plastid	33.97	21.58
TraesCS7A01G335400.1	Wheat	cytosol	15.31	19.16

Protein Annotations

EnsemblPlants:TraesCS5A01G475200.1	EnsemblPlantsGene:TraesCS5A01G475200	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488	GO:GO:0006810
GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121
PANTHER:PTHR22814	PANTHER:PTHR22814:SF82	PFAM:PF00403	PFscan:PS50846	SEG:seg	SUPFAM:SSF55008
TIGR:cd00371	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr5A:-:650517357..650519056

Molecular Weight (calculated)

21847.3 Da

IEP (calculated)

10.245

GRAVY (calculated)

-0.163

Length

209 amino acids

Sequence
(BLAST)

001: MAPLLFKDMR SLSCSSPAST AICPSLERQP IFRPQKAGAS PLFQVPAEPR AHRQDGRKGQ QQHHHHRAGV ANGELASPAG STRFLLSGCA AVDEIQEVAT
101: VAAAPPAAAP GGDVRREEPA AADVKNTNTS TQEQVVVLKV SLHCKACAGK VKKHLAKMEG VRTFSIDFAA KKVTVVGDVT PLGVLASVSK VKNAQIWAAA
201: PPPQPAMAA

Best Arabidopsis Sequence Match ( AT2G37390.1 )
(BLAST)

001: MKGRMFCASQ ASTAICSSMD HVHKSTTTDE DERNSGRAID RHNPIIKDGR RSFADDFIKL PTSAEDGEMS NKKLEIYKGR RSITGRRSTG GGGGGGAAAL
101: LKLITNDIGL ARKSFSCVAR PACDLIKTPV GSTRYLLGSD PDSITGSVDQ DPAKTVEAEA PAGEDKTLTE KKTTCGDTDQ QVVVLKVSLH CRGCEGKVRK
201: HLARMQGVTS FNIDFAAKKV TVTGDITPLE ILDSISKVKN AQFWTNPTIP KPNVETQNP

Arabidopsis Description

NAKR2Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q58FZ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.