CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32346	Soybean	plastid	91.3	90.0
KRG95861	Soybean	plastid	69.2	65.86
KRH67578	Soybean	plastid	68.84	65.52
VIT_08s0040g02700.t01	Wine grape	cytosol, plastid	55.8	57.04
GSMUA_Achr4P30560_001	Banana	plastid	33.7	48.19
GSMUA_Achr2P16130_001	Banana	mitochondrion, plastid	36.59	47.2
Solyc10g085910.1.1	Tomato	nucleus	49.28	45.79
GSMUA_Achr9P03120_001	Banana	plastid	36.23	45.05
GSMUA_Achr10P...	Banana	cytosol, plastid	28.62	44.89
PGSC0003DMT400045359	Potato	cytosol	48.55	44.67
GSMUA_Achr7P10400_001	Banana	plastid	33.7	43.87
KRH10325	Soybean	plastid	29.35	43.78
GSMUA_Achr6P34370_001	Banana	plastid	35.14	43.69
KRH22990	Soybean	cytosol	20.65	42.86
GSMUA_Achr7P15330_001	Banana	plastid	32.97	42.72
CDY07583	Canola	cytosol	36.59	41.56
Bra003142.1-P	Field mustard	cytosol, plastid	37.32	41.37
KRH29875	Soybean	plastid	35.87	41.25
CDY52751	Canola	cytosol	37.32	41.2
AT2G37390.1	Thale cress	cytosol	38.41	40.93
EER90630	Sorghum	plastid	31.52	40.85
KRH25010	Soybean	plastid	35.51	40.83
CDY67353	Canola	cytosol, plastid	37.68	40.78
CDX91358	Canola	cytosol	39.86	40.59
Bra007008.1-P	Field mustard	cytosol, plastid	37.32	40.39
AT3G53530.2	Thale cress	cytosol, plastid	36.23	40.32
CDX73547	Canola	cytosol, plastid	36.96	40.32
CDX74966	Canola	cytosol	39.49	40.07
Bra005201.1-P	Field mustard	cytosol	38.77	39.78
Bra017191.1-P	Field mustard	cytosol	38.04	39.62
HORVU5Hr1G112560.1	Barley	plastid	29.71	39.61
Zm00001d034634_P001	Maize	plastid	30.07	39.52
CDX93383	Canola	cytosol	38.04	39.47
Os03t0819400-01	Rice	plastid	28.99	39.41
Zm00001d012973_P001	Maize	plastid	30.07	39.34
TraesCS5B01G488200.1	Wheat	plastid	30.07	39.34
TraesCS5A01G475200.1	Wheat	plastid	29.71	39.23
CDY18449	Canola	cytosol	37.68	38.81
KRH34745	Soybean	endoplasmic reticulum	11.23	38.27
KRH58299	Soybean	mitochondrion	22.83	37.95
KRH42188	Soybean	cytosol, plastid	22.46	36.9
KRH48431	Soybean	cytosol	17.75	36.3
KRH10507	Soybean	plastid	22.46	36.26
KRG92037	Soybean	cytosol	15.22	34.15
KRH60302	Soybean	cytosol, extracellular	16.3	34.09
KRH39252	Soybean	cytosol	16.67	34.07
KRH43920	Soybean	cytosol	20.29	33.53
KRH41596	Soybean	cytosol	15.94	33.33
KRH71640	Soybean	cytosol, mitochondrion, plastid	12.68	26.92
KRH33278	Soybean	cytosol	12.68	26.92
Zm00001d038419_P001	Maize	cytosol	18.12	22.03

Protein Annotations

EntrezGene:100813295	Gene3D:3.30.70.100	MapMan:35.1	EMBL:ACUP02008197	EnsemblPlantsGene:GLYMA_13G133600	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810
GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0030001	GO:GO:0046872	GO:GO:0046914
GO:GO:0046916	InterPro:HMA_dom	InterPro:HMA_dom_sf	UniProt:I1LYW7	InterPro:IPR006121	EnsemblPlants:KRH19750
ProteinID:KRH19750	ProteinID:KRH19750.1	PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF82
SUPFAM:SSF55008	UniParc:UPI000233AC3B	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:24594787..24596525

Molecular Weight (calculated)

29665.1 Da

IEP (calculated)

10.047

GRAVY (calculated)

-0.474

Length

276 amino acids

Sequence
(BLAST)

001: MKRIDIFCAS QASTAICLSM DQASCSSSNT ILLGGRTIDR HNPIINDSRR STSKSLTAPC SSSQSPINPK PYHELHKAKK NSSSKNATKG HDNQKKRSTA
101: EKLTEHVTNT SKPIDDIVPR SWLKPPADLI TPPGSTRSLL SDTALLDGSS DYDPVLALTT MINNKTSQAV HQDEANPVSK LSSSSHPKSG SSDQVVVLRV
201: SLHCKGCEGK VRKHLSRMQG VTSFNIDFAS KKVTVVGDVT PLSVLASISK VKNAQLWPAS ASAVESGTVE TEKKYI

Best Arabidopsis Sequence Match ( AT2G37390.2 )
(BLAST)

001: MKGRMFCASQ ASTAICSSMD HVHKSTTTDE DERNSGRAID RHNPIIKDGR RSFADDFIKL PTSAEDGEMS NKKLEIYKGR RSITGRRSTG GGGGGGAAAL
101: LKLITNDIGL ARKSFSCVAR PACDLIKTPV GSTRYLLGSD PDSITGSVDQ DPAKTVEAEA PAGEDKTLTE KKTTCGDTDQ VVVLKVSLHC RGCEGKVRKH
201: LARMQGVTSF NIDFAAKKVT VTGDITPLEI LDSISKVKNA QFWTNPTIPK PNVETQNP

Arabidopsis Description

NAKR2Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q58FZ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.