CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH42188	Soybean	cytosol, plastid	93.98	92.86
KRH10507	Soybean	plastid	68.07	66.08
KRH43920	Soybean	cytosol	62.05	61.68
PGSC0003DMT400032793	Potato	plastid	59.04	58.33
Solyc01g105000.2.1	Tomato	mitochondrion, plastid	59.64	55.62
VIT_12s0055g00930.t01	Wine grape	plastid	53.01	52.69
GSMUA_Achr10P...	Banana	cytosol	48.19	49.08
GSMUA_Achr5P04340_001	Banana	cytosol	45.18	48.08
GSMUA_Achr7P17730_001	Banana	cytosol, endoplasmic reticulum, plastid	34.34	42.86
TraesCS1A01G283600.1	Wheat	cytosol	45.18	40.32
TraesCS1B01G292800.1	Wheat	cytosol	44.58	39.78
TraesCS1D01G282700.1	Wheat	mitochondrion	44.58	39.78
HORVU1Hr1G072500.1	Barley	mitochondrion	45.18	39.06
Os08t0405700-01	Rice	mitochondrion	45.18	36.59
KXG25122	Sorghum	mitochondrion	45.78	36.02
KRH34745	Soybean	endoplasmic reticulum	17.47	35.8
KRH48431	Soybean	cytosol	26.51	32.59
KRH10325	Soybean	plastid	36.14	32.43
KRH22990	Soybean	cytosol	25.9	32.33
KRH60302	Soybean	cytosol, extracellular	24.7	31.06
KRH39252	Soybean	cytosol	24.7	30.37
KRH41596	Soybean	cytosol	24.1	30.3
Zm00001d050277_P001	Maize	mitochondrion	33.73	29.47
KRH71640	Soybean	cytosol, mitochondrion, plastid	21.08	26.92
KRH33278	Soybean	cytosol	21.08	26.92
KRG92037	Soybean	cytosol	19.28	26.02
KRH19750	Soybean	plastid	37.95	22.83
KRH29875	Soybean	plastid	32.53	22.5
KRH25010	Soybean	plastid	31.33	21.67
KRH32346	Soybean	plastid	35.54	21.07
KRG95861	Soybean	plastid	36.14	20.69
KRH67578	Soybean	plastid	35.54	20.34

Protein Annotations

EntrezGene:100802591	Gene3D:3.30.70.100	MapMan:35.1	EMBL:ACUP02003248	EnsemblPlantsGene:GLYMA_05G119300	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810
GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0030001	GO:GO:0046872	GO:GO:0046914
GO:GO:0046916	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121	UniProt:K7KPR5	EnsemblPlants:KRH58299
ProteinID:KRH58299	ProteinID:KRH58299.1	PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF80
SUPFAM:SSF55008	UniParc:UPI00023396AA	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:31213190..31215641

Molecular Weight (calculated)

18832.2 Da

IEP (calculated)

10.616

GRAVY (calculated)

-0.370

Length

166 amino acids

Sequence
(BLAST)

001: MSLKSSERKI MRRGFMCHSQ ASTAVCMSTR DPRSVVVPKK LERRVFLDDT RLINYAKYSK LVEPPRSNPV PKIKLRGQDQ VQANEPRELL KTQTDNNVFQ
101: VVVMRVAIHC QGCAGKVKKH LSKMEGVTSF SIDVESKRVT VMGHISPVEV LESISKVKRA EFWTAC

Best Arabidopsis Sequence Match ( AT3G53530.1 )
(BLAST)

001: MKAGMFYCAS QASTATANGE RTVTARAIDR HNPIIKDGRR SFTAPCSSGD DYVAPYRQLS KITRVPSSSG DGKSVQVDKG RRSNSGSLMK LISYDVSLAR
101: KSFGCVVATP KTPPGSTRYL LGSDPVSLAG STGQDTVATE ESEASAPKRG SSGPVEEKKK SSGSGSDQVV VLRVSLHCHC RGCQGKVKKH LSKMQGVTSF
201: NIDFASKKVT VTGDITPLEV LGCLSKVKNA QFWTPPPPSI PRANPET

Arabidopsis Description

NAKR3Chloroplast-targeted copper chaperone protein [Source:TAIR;Acc:AT3G53530]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.