CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G283600.1	Wheat	cytosol	70.62	80.11
HORVU1Hr1G072500.1	Barley	mitochondrion	72.51	79.69
TraesCS1B01G292800.1	Wheat	cytosol	70.14	79.57
TraesCS1D01G282700.1	Wheat	mitochondrion	69.67	79.03
Os08t0405700-01	Rice	mitochondrion	73.93	76.1
Zm00001d050277_P001	Maize	mitochondrion	60.19	66.84
GSMUA_Achr10P...	Banana	cytosol	47.87	61.96
GSMUA_Achr5P04340_001	Banana	cytosol	43.13	58.33
VIT_12s0055g00930.t01	Wine grape	plastid	42.65	53.89
GSMUA_Achr7P17730_001	Banana	cytosol, endoplasmic reticulum, plastid	32.23	51.13
KRH10507	Soybean	plastid	38.39	47.37
KRH43920	Soybean	cytosol	36.97	46.71
KRH58299	Soybean	mitochondrion	36.02	45.78
PGSC0003DMT400032793	Potato	plastid	35.55	44.64
KRH42188	Soybean	cytosol, plastid	35.55	44.64
EES17440	Sorghum	cytosol, plastid	16.59	40.23
Solyc01g105000.2.1	Tomato	mitochondrion, plastid	33.65	39.89
EES01377	Sorghum	cytosol	26.07	37.16
KXG22404	Sorghum	extracellular	24.17	34.46
OQU87104	Sorghum	cytosol, mitochondrion	20.85	33.85
EES06905	Sorghum	cytosol	16.59	30.97
EER90630	Sorghum	plastid	27.96	27.7
EES02979	Sorghum	mitochondrion, nucleus	30.33	19.57

Protein Annotations

EnsemblPlants:KXG25122	EnsemblPlantsGene:SORBI_3007G123400	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488	GO:GO:0006810
GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121
PANTHER:PTHR22814	PANTHER:PTHR22814:SF80	PFAM:PF00403	PFscan:PS50846	ProteinID:KXG25122	ProteinID:KXG25122.1
SEG:seg	SUPFAM:SSF55008	UniParc:UPI0003C64891	UniProt:A0A1B6PHG4	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr7:+:52904285..52910364

Molecular Weight (calculated)

21990.9 Da

IEP (calculated)

11.428

GRAVY (calculated)

-0.164

Length

211 amino acids

Sequence
(BLAST)

001: MRAGGMLCRS QAATAVCVPG DARSMVVSRR ADRTIVADDD ARRALHDVRY ARLGGGGGDG GRRSTSRRFA AARAAAPPPP PSASASCKPR VERQQRRPAT
101: RAPVAVAVTL PMVTKSPSKE APPKDLAAAA KRVQAAVAAA PGDQLLQVVV MKVAIHCQGC AGKVRKHISK MEGVTSFSID LESKKVTVMG HVSPAGVLES
201: ISKVKKAELL A

Best Arabidopsis Sequence Match ( AT2G28660.1 )
(BLAST)

001: MRFSDIFCSS PASTAVRHST LHHDGNVTGG RRSFQSHLRS QNPSKKKDKT VPCFSSEMPL IPIPRHLSCR NSFESPSGFR PKIASARGSD VQIRRKSSAD
101: VSDLRRSRSS LLSSSSRYLL KDHKSLKGDD KDLWLSSDRS KDLILYRDRN VTSSASSSSS SSSSSFSSSV TNVSSPAPST DDQVVVLRVS IHCKGCEGKV
201: RKHISKMEGV TSYTIDLATK KVTVVGKITP VGLVESISKV KFAQLWPSSS SPPFPHIPNY SLLKS

Arabidopsis Description

At2g28660 [Source:UniProtKB/TrEMBL;Acc:Q7XZS3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.