Factsheet for PGSC0003DMT400032793

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
plasma membrane 1
mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g105000.2.1	Tomato	mitochondrion, plastid	89.29	84.27
KRH58299	Soybean	mitochondrion	58.33	59.04
KRH42188	Soybean	cytosol, plastid	58.93	58.93
KRH10507	Soybean	plastid	52.98	52.05
GSMUA_Achr10P...	Banana	cytosol	50.0	51.53
GSMUA_Achr5P04340_001	Banana	cytosol	47.62	51.28
KRH43920	Soybean	cytosol	50.0	50.3
VIT_12s0055g00930.t01	Wine grape	plastid	50.0	50.3
GSMUA_Achr7P17730_001	Banana	cytosol, endoplasmic reticulum, plastid	36.9	46.62
PGSC0003DMT400060399	Potato	cytosol, plastid	20.83	43.21
TraesCS1A01G283600.1	Wheat	cytosol	44.64	40.32
TraesCS1D01G282700.1	Wheat	mitochondrion	43.45	39.25
TraesCS1B01G292800.1	Wheat	cytosol	42.86	38.71
HORVU1Hr1G072500.1	Barley	mitochondrion	44.05	38.54
Os08t0405700-01	Rice	mitochondrion	44.05	36.1
KXG25122	Sorghum	mitochondrion	44.64	35.55
PGSC0003DMT400050141	Potato	cytosol, plastid	20.24	32.08
Zm00001d050277_P001	Maize	mitochondrion	33.93	30.0
PGSC0003DMT400001032	Potato	cytosol	24.4	27.52
PGSC0003DMT400040203	Potato	cytosol	38.1	24.62
PGSC0003DMT400045359	Potato	cytosol	33.93	19.0

Protein Annotations

EntrezGene:102587724	Gene3D:3.30.70.100	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0006810
GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121
UniProt:M1AY21	PFAM:PF00403	EnsemblPlantsGene:PGSC0003DMG400012592	PGSC:PGSC0003DMG400012592	EnsemblPlants:PGSC0003DMT400032793	PFscan:PS50846
PANTHER:PTHR22814	PANTHER:PTHR22814:SF80	SUPFAM:SSF55008	UniParc:UPI000295A423	RefSeq:XP_006351801.1	SEG:seg

Description

Chloroplast-targeted copper chaperone [Source:PGSC_GENE;Acc:PGSC0003DMG400012592]

Coordinates

chr1:+:81766806..81768151

Molecular Weight (calculated)

18339.5 Da

IEP (calculated)

10.493

GRAVY (calculated)

-0.093

Length

168 amino acids

Sequence
(BLAST)

001: MRGFMCQPQV STAVCLSCDS RSVVVPAARR RMSMEDHTKL INKCKRLGDV PRTLGSMPIS KRSRNVAAAA GSSVLTISKR DQENGCKIVP SIPFTDNSFQ
101: VVVMRVSLHC QGCAGKVKKH LSKMEGVTSF SIDLDSQRVT VMGHVSPVGV LESISKVKRA EFWPLNSC

Best Arabidopsis Sequence Match ( AT2G28660.1 )
(BLAST)

001: MRFSDIFCSS PASTAVRHST LHHDGNVTGG RRSFQSHLRS QNPSKKKDKT VPCFSSEMPL IPIPRHLSCR NSFESPSGFR PKIASARGSD VQIRRKSSAD
101: VSDLRRSRSS LLSSSSRYLL KDHKSLKGDD KDLWLSSDRS KDLILYRDRN VTSSASSSSS SSSSSFSSSV TNVSSPAPST DDQVVVLRVS IHCKGCEGKV
201: RKHISKMEGV TSYTIDLATK KVTVVGKITP VGLVESISKV KFAQLWPSSS SPPFPHIPNY SLLKS

Arabidopsis Description

At2g28660 [Source:UniProtKB/TrEMBL;Acc:Q7XZS3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.