Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g073020.1.1 | Tomato | cytosol | 94.62 | 95.35 |
| GSMUA_Achr4P30560_001 | Banana | plastid | 37.69 | 50.78 |
| GSMUA_Achr10P... | Banana | cytosol, plastid | 32.31 | 47.73 |
| GSMUA_Achr2P16130_001 | Banana | mitochondrion, plastid | 38.85 | 47.2 |
| GSMUA_Achr6P34370_001 | Banana | plastid | 38.46 | 45.05 |
| GSMUA_Achr9P03120_001 | Banana | plastid | 37.69 | 44.14 |
| GSMUA_Achr7P15330_001 | Banana | plastid | 36.15 | 44.13 |
| GSMUA_Achr7P10400_001 | Banana | plastid | 35.77 | 43.87 |
| PGSC0003DMT400060399 | Potato | cytosol, plastid | 13.46 | 43.21 |
| PGSC0003DMT400032793 | Potato | plastid | 24.62 | 38.1 |
| PGSC0003DMT400001032 | Potato | cytosol | 21.15 | 36.91 |
| PGSC0003DMT400045359 | Potato | cytosol | 41.92 | 36.33 |
| PGSC0003DMT400050141 | Potato | cytosol, plastid | 13.08 | 32.08 |
Protein Annotations
| EntrezGene:102581501 | Gene3D:3.30.70.100 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 |
| UniProt:M1B9I7 | PFAM:PF00403 | EnsemblPlantsGene:PGSC0003DMG400015555 | PGSC:PGSC0003DMG400015555 | EnsemblPlants:PGSC0003DMT400040203 | PFscan:PS50846 |
| PANTHER:PTHR22814 | PANTHER:PTHR22814:SF82 | SUPFAM:SSF55008 | UniParc:UPI000295FE59 | RefSeq:XP_006363355.1 | SEG:seg |
Description
Chloroplast-targeted copper chaperone [Source:PGSC_GENE;Acc:PGSC0003DMG400015555]
Coordinates
chr11:-:45208003..45209479
Molecular Weight (calculated)
28827.3 Da
IEP (calculated)
10.288
GRAVY (calculated)
-0.543
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSIDLFCAS PASTAICSSM DQYTMVRRGI RHQIDRKIDR LGDPRTPKIK TPIPCSSHQL PFDPKTYYHQ NKNRKSHDEK LRRKSSADVT DLGNSSRYLL
101: SDSTNTPFID FLSSSGDTSK ALIPSKPLRA KSTNERLMYR SSSTRLLESP VYKPSSAYST DLCVYKSTRS CPGEQVVELR VSIHCKGCEG KVRKHISRME
201: GVKSFNIDLA SKKVTVIGDV TPLGVLTSVS KVKNAQFWPF PTASSSSSSS SSSSWSSPMI
101: SDSTNTPFID FLSSSGDTSK ALIPSKPLRA KSTNERLMYR SSSTRLLESP VYKPSSAYST DLCVYKSTRS CPGEQVVELR VSIHCKGCEG KVRKHISRME
201: GVKSFNIDLA SKKVTVIGDV TPLGVLTSVS KVKNAQFWPF PTASSSSSSS SSSSWSSPMI
001: MRFSDIFCSS PASTAVRHST LHHDGNVTGG RRSFQSHLRS QNPSKKKDKT VPCFSSEMPL IPIPRHLSCR NSFESPSGFR PKIASARGSD VQIRRKSSAD
101: VSDLRRSRSS LLSSSSRYLL KDHKSLKGDD KDLWLSSDRS KDLILYRDRN VTSSASSSSS SSSSSFSSSV TNVSSPAPST DDQVVVLRVS IHCKGCEGKV
201: RKHISKMEGV TSYTIDLATK KVTVVGKITP VGLVESISKV KFAQLWPSSS SPPFPHIPNY SLLKS
101: VSDLRRSRSS LLSSSSRYLL KDHKSLKGDD KDLWLSSDRS KDLILYRDRN VTSSASSSSS SSSSSFSSSV TNVSSPAPST DDQVVVLRVS IHCKGCEGKV
201: RKHISKMEGV TSYTIDLATK KVTVVGKITP VGLVESISKV KFAQLWPSSS SPPFPHIPNY SLLKS
Arabidopsis Description
At2g28660 [Source:UniProtKB/TrEMBL;Acc:Q7XZS3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.