Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400040203 | Potato | cytosol | 95.35 | 94.62 |
| GSMUA_Achr4P30560_001 | Banana | plastid | 37.98 | 50.78 |
| GSMUA_Achr10P... | Banana | cytosol, plastid | 32.17 | 47.16 |
| GSMUA_Achr2P16130_001 | Banana | mitochondrion, plastid | 38.76 | 46.73 |
| GSMUA_Achr6P34370_001 | Banana | plastid | 38.37 | 44.59 |
| GSMUA_Achr9P03120_001 | Banana | plastid | 37.6 | 43.69 |
| GSMUA_Achr7P10400_001 | Banana | plastid | 35.66 | 43.4 |
| Solyc05g055310.2.1 | Tomato | plastid | 13.57 | 43.21 |
| GSMUA_Achr7P15330_001 | Banana | plastid | 35.66 | 43.19 |
| Solyc10g085910.1.1 | Tomato | nucleus | 41.86 | 36.36 |
| Solyc01g105000.2.1 | Tomato | mitochondrion, plastid | 24.81 | 35.96 |
| Solyc11g007200.1.1 | Tomato | extracellular | 13.18 | 30.09 |
Protein Annotations
| Gene3D:3.30.70.100 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 |
| GO:GO:0030001 | GO:GO:0046872 | GO:GO:0046914 | GO:GO:0046916 | InterPro:HMA_dom | InterPro:HMA_dom_sf |
| InterPro:IPR006121 | UniProt:K4DB08 | PFAM:PF00403 | PFscan:PS50846 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF82 |
| SUPFAM:SSF55008 | EnsemblPlantsGene:Solyc11g073020.1 | EnsemblPlants:Solyc11g073020.1.1 | UniParc:UPI0002769FC8 | SEG:seg | : |
Description
No Description!
Coordinates
chr11:-:56151023..56152239
Molecular Weight (calculated)
28595.9 Da
IEP (calculated)
10.215
GRAVY (calculated)
-0.556
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSIDIFCAS PASTAICSSM DQYTMVRRGI RHQIDRKIDR LGDPRTPKIK TPIPCSSNQL PFDPKTYYHQ NKNRKSHDEK LRRKSSADVT DLGNSSRYLL
101: SDHSTNTPFI DFLSSSGDAS KALVPTKPLR AKSTNERLMY RSSSLESPVY KPSSAYSNDL CVYKSTRSCP SEQVVELRVS IHCKGCEGKV RKHISRMEGV
201: KSFNIDLASK KVTVIGDVTP LGVLTSVSKV KNAQFWPFPT TSSSSSSSSS SSWSSPII
101: SDHSTNTPFI DFLSSSGDAS KALVPTKPLR AKSTNERLMY RSSSLESPVY KPSSAYSNDL CVYKSTRSCP SEQVVELRVS IHCKGCEGKV RKHISRMEGV
201: KSFNIDLASK KVTVIGDVTP LGVLTSVSKV KNAQFWPFPT TSSSSSSSSS SSWSSPII
001: MRFSDIFCSS PASTAVRHST LHHDGNVTGG RRSFQSHLRS QNPSKKKDKT VPCFSSEMPL IPIPRHLSCR NSFESPSGFR PKIASARGSD VQIRRKSSAD
101: VSDLRRSRSS LLSSSSRYLL KDHKSLKGDD KDLWLSSDRS KDLILYRDRN VTSSASSSSS SSSSSFSSSV TNVSSPAPST DDQVVVLRVS IHCKGCEGKV
201: RKHISKMEGV TSYTIDLATK KVTVVGKITP VGLVESISKV KFAQLWPSSS SPPFPHIPNY SLLKS
101: VSDLRRSRSS LLSSSSRYLL KDHKSLKGDD KDLWLSSDRS KDLILYRDRN VTSSASSSSS SSSSSFSSSV TNVSSPAPST DDQVVVLRVS IHCKGCEGKV
201: RKHISKMEGV TSYTIDLATK KVTVVGKITP VGLVESISKV KFAQLWPSSS SPPFPHIPNY SLLKS
Arabidopsis Description
At2g28660 [Source:UniProtKB/TrEMBL;Acc:Q7XZS3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.