Factsheet for GSMUA_Achr6P34370_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
vacuole 1
mitochondrion 3
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P03120_001	Banana	plastid	84.68	84.68
GSMUA_Achr4P30560_001	Banana	plastid	55.41	63.73
GSMUA_Achr2P16130_001	Banana	mitochondrion, plastid	61.26	63.55
GSMUA_Achr7P10400_001	Banana	plastid	54.05	56.6
GSMUA_Achr7P15330_001	Banana	plastid	48.2	50.23
Os03t0819400-01	Rice	plastid	40.54	44.34
GSMUA_Achr10P...	Banana	cytosol, plastid	35.14	44.32
Zm00001d034634_P001	Maize	plastid	41.44	43.81
Zm00001d012973_P001	Maize	plastid	40.54	42.65
EER90630	Sorghum	plastid	40.09	41.78
TraesCS5A01G475200.1	Wheat	plastid	38.74	41.15
TraesCS5B01G488200.1	Wheat	plastid	38.74	40.76
GSMUA_Achr1P14500_001	Banana	cytosol	24.77	40.74
HORVU5Hr1G112560.1	Barley	plastid	37.84	40.58
GSMUA_Achr10P...	Banana	cytosol	29.28	39.88
VIT_08s0040g02700.t01	Wine grape	cytosol, plastid	47.75	39.26
PGSC0003DMT400040203	Potato	cytosol	45.05	38.46
GSMUA_Achr5P04340_001	Banana	cytosol	27.03	38.46
Solyc11g073020.1.1	Tomato	cytosol	44.59	38.37
GSMUA_Achr10P...	Banana	cytosol	5.86	36.11
GSMUA_Achr7P17730_001	Banana	cytosol, endoplasmic reticulum, plastid	21.62	36.09
CDX93383	Canola	cytosol	42.34	35.34
CDY67353	Canola	cytosol, plastid	40.54	35.29
CDX73547	Canola	cytosol, plastid	40.09	35.18
KRH19750	Soybean	plastid	43.69	35.14
AT2G37390.1	Thale cress	cytosol	40.99	35.14
Bra005201.1-P	Field mustard	cytosol	42.34	34.94
Bra007008.1-P	Field mustard	cytosol, plastid	40.09	34.9
GSMUA_Achr6P07500_001	Banana	cytosol, plastid	17.57	34.82
Bra017191.1-P	Field mustard	cytosol	41.44	34.72
CDX91358	Canola	cytosol	42.34	34.69
AT3G53530.2	Thale cress	cytosol, plastid	38.74	34.68
CDX74966	Canola	cytosol	42.34	34.56
GSMUA_Achr8P26110_001	Banana	cytosol	24.32	34.39
CDY18449	Canola	cytosol	41.44	34.33
CDY07583	Canola	cytosol	37.39	34.16
CDY52751	Canola	cytosol	38.29	34.0
KRG95861	Soybean	plastid	44.14	33.79
KRH67578	Soybean	plastid	44.14	33.79
Bra003142.1-P	Field mustard	cytosol, plastid	37.84	33.73
KRH32346	Soybean	plastid	41.89	33.21
GSMUA_Achr6P17300_001	Banana	cytosol	14.86	30.28
CDY68400	Canola	plastid	38.29	29.21
CDY04859	Canola	cytosol	38.29	27.87
AT5G02600.1	Thale cress	plastid	37.84	26.33
Bra028868.1-P	Field mustard	cytosol, plastid	34.23	26.3
Zm00001d038419_P001	Maize	cytosol	26.58	25.99
CDY10437	Canola	cytosol, plastid	36.94	25.87
Bra009578.1-P	Field mustard	cytosol, plastid	36.94	24.92

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0006810	GO:GO:0008150
GO:GO:0030001	GO:GO:0046872	EnsemblPlantsGene:GSMUA_Achr6G34370_001	EnsemblPlants:GSMUA_Achr6P34370_001	EnsemblPlants:GSMUA_Achr6T34370_001	InterPro:HMA_dom
InterPro:HMA_dom_sf	InterPro:IPR006121	UniProt:M0TCN0	PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814
PANTHER:PTHR22814:SF82	SUPFAM:SSF55008	UniParc:UPI0002961600	SEG:seg	:	:

Description

Putative heavy metal-associated domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G34370_001]

Coordinates

chr6:+:33019441..33020348

Molecular Weight (calculated)

24371.4 Da

IEP (calculated)

10.471

GRAVY (calculated)

-0.432

Length

222 amino acids

Sequence
(BLAST)

001: MASLLFKEKR GVNFSCVSPA SAAICTSIDR RSMVQPSTGR TIDRHTPHLR DPRRAKASVN AMSQTPTKPK TCNQRNKKSL ERASDTLSTP GSTRYLLDDD
101: YGDAYFSNVL PDVEPLPPLM SLEPPTLRAL MREEPARLRP SAAARTQGQV VVLRVSLHCK GCEGKVRKHI SKMEGVTSFD IDFATKKVTV IGDVTPLGVL
201: SSISKVKHAQ FWPSPPRASD SL

Best Arabidopsis Sequence Match ( AT2G37390.1 )
(BLAST)

001: MKGRMFCASQ ASTAICSSMD HVHKSTTTDE DERNSGRAID RHNPIIKDGR RSFADDFIKL PTSAEDGEMS NKKLEIYKGR RSITGRRSTG GGGGGGAAAL
101: LKLITNDIGL ARKSFSCVAR PACDLIKTPV GSTRYLLGSD PDSITGSVDQ DPAKTVEAEA PAGEDKTLTE KKTTCGDTDQ QVVVLKVSLH CRGCEGKVRK
201: HLARMQGVTS FNIDFAAKKV TVTGDITPLE ILDSISKVKN AQFWTNPTIP KPNVETQNP

Arabidopsis Description

NAKR2Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q58FZ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.