Factsheet for GSMUA_Achr2P16130_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

nucleus 2
mitochondrion 4
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P30560_001	Banana	plastid	67.29	74.61
GSMUA_Achr6P34370_001	Banana	plastid	63.55	61.26
GSMUA_Achr7P10400_001	Banana	plastid	60.28	60.85
GSMUA_Achr9P03120_001	Banana	plastid	60.75	58.56
GSMUA_Achr7P15330_001	Banana	plastid	49.53	49.77
GSMUA_Achr10P...	Banana	cytosol, plastid	40.19	48.86
EER90630	Sorghum	plastid	42.06	42.25
Zm00001d034634_P001	Maize	plastid	41.12	41.9
Os03t0819400-01	Rice	plastid	38.78	40.89
GSMUA_Achr10P...	Banana	cytosol	30.84	40.49
GSMUA_Achr5P04340_001	Banana	cytosol	29.44	40.38
Zm00001d012973_P001	Maize	plastid	39.72	40.28
GSMUA_Achr1P14500_001	Banana	cytosol	24.77	39.26
HORVU5Hr1G112560.1	Barley	plastid	37.85	39.13
TraesCS5B01G488200.1	Wheat	plastid	38.32	38.86
PGSC0003DMT400040203	Potato	cytosol	47.2	38.85
Solyc11g073020.1.1	Tomato	cytosol	46.73	38.76
VIT_08s0040g02700.t01	Wine grape	cytosol, plastid	48.6	38.52
TraesCS5A01G475200.1	Wheat	plastid	37.38	38.28
GSMUA_Achr7P17730_001	Banana	cytosol, endoplasmic reticulum, plastid	23.36	37.59
KRG95861	Soybean	plastid	50.47	37.24
GSMUA_Achr6P07500_001	Banana	cytosol, plastid	19.16	36.61
KRH19750	Soybean	plastid	47.2	36.59
KRH67578	Soybean	plastid	49.53	36.55
KRH32346	Soybean	plastid	45.79	35.0
Bra003142.1-P	Field mustard	cytosol, plastid	39.25	33.73
AT2G37390.1	Thale cress	cytosol	40.65	33.59
AT3G53530.2	Thale cress	cytosol, plastid	38.78	33.47
GSMUA_Achr10P...	Banana	cytosol	5.61	33.33
CDY67353	Canola	cytosol, plastid	39.72	33.33
CDY07583	Canola	cytosol	37.85	33.33
CDX73547	Canola	cytosol, plastid	39.25	33.2
CDY52751	Canola	cytosol	38.78	33.2
Bra007008.1-P	Field mustard	cytosol, plastid	39.25	32.94
CDX93383	Canola	cytosol	40.65	32.71
GSMUA_Achr8P26110_001	Banana	cytosol	23.83	32.48
CDX91358	Canola	cytosol	41.12	32.47
Bra017191.1-P	Field mustard	cytosol	40.19	32.45
CDY18449	Canola	cytosol	40.19	32.09
CDX74966	Canola	cytosol	40.65	31.99
Bra005201.1-P	Field mustard	cytosol	40.19	31.97
GSMUA_Achr6P17300_001	Banana	cytosol	15.89	31.19
CDY04859	Canola	cytosol	44.39	31.15
CDY68400	Canola	plastid	42.06	30.93
Bra028868.1-P	Field mustard	cytosol, plastid	40.19	29.76
AT5G02600.1	Thale cress	plastid	42.06	28.21
CDY10437	Canola	cytosol, plastid	41.12	27.76
Bra009578.1-P	Field mustard	cytosol, plastid	41.12	26.75
Zm00001d038419_P001	Maize	cytosol	24.77	23.35

Protein Annotations

EnsemblPlants:GSMUA_Achr2P16130_001	EnsemblPlants:GSMUA_Achr2T16130_001	EnsemblPlantsGene:GSMUA_Achr2G16130_001	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488
GO:GO:0006810	GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:IPR006121	PANTHER:PTHR22814	PANTHER:PTHR22814:SF82	PFAM:PF00403	PFscan:PS50846	SEG:seg
SUPFAM:SSF55008	UniParc:UPI000295545F	UniProt:M0S8F4	MapMan:35.1	:	:

Description

Putative heavy metal-associated domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G16130_001]

Coordinates

chr2:-:17154701..17155513

Molecular Weight (calculated)

23428.0 Da

IEP (calculated)

10.835

GRAVY (calculated)

-0.406

Length

214 amino acids

Sequence
(BLAST)

001: MRRVNFSCVS PASAAICTSI DRRSMVRAST RRAIDRHTPH LRDPRRAKSA FSSVTRTATE KKSHSQRRKS LDKPTDLISP PGSSRYLLND DAFFDVFPIV
101: DAAPPPLFSV ERSQLEIIKK DVPAAVSTPS SAVPQNQVVH LRVSLHCKGC EGKVRKHISK MEGVTSFDID FETKKVTVVG DVTPLGVLNS ISKVKNAQFW
201: PSPSSSPPPP PASS

Best Arabidopsis Sequence Match ( AT3G53530.1 )
(BLAST)

001: MKAGMFYCAS QASTATANGE RTVTARAIDR HNPIIKDGRR SFTAPCSSGD DYVAPYRQLS KITRVPSSSG DGKSVQVDKG RRSNSGSLMK LISYDVSLAR
101: KSFGCVVATP KTPPGSTRYL LGSDPVSLAG STGQDTVATE ESEASAPKRG SSGPVEEKKK SSGSGSDQVV VLRVSLHCHC RGCQGKVKKH LSKMQGVTSF
201: NIDFASKKVT VTGDITPLEV LGCLSKVKNA QFWTPPPPSI PRANPET

Arabidopsis Description

NAKR3Chloroplast-targeted copper chaperone protein [Source:TAIR;Acc:AT3G53530]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.