Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 3
- nucleus 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol | 26.61 | 80.56 |
| Solyc05g055310.2.1 | Tomato | plastid | 55.05 | 74.07 |
| PGSC0003DMT400060399 | Potato | cytosol, plastid | 55.05 | 74.07 |
| VIT_13s0074g00770.t01 | Wine grape | cytosol | 56.88 | 72.09 |
| PGSC0003DMT400050141 | Potato | cytosol, plastid | 64.22 | 66.04 |
| GSMUA_Achr6P07500_001 | Banana | cytosol, plastid | 65.14 | 63.39 |
| Zm00001d016691_P001 | Maize | extracellular | 63.3 | 61.61 |
| Solyc11g007200.1.1 | Tomato | extracellular | 62.39 | 60.18 |
| EES06905 | Sorghum | cytosol | 61.47 | 59.29 |
| KRH33278 | Soybean | cytosol | 57.8 | 48.46 |
| KRH71640 | Soybean | cytosol, mitochondrion, plastid | 56.88 | 47.69 |
| GSMUA_Achr1P14500_001 | Banana | cytosol | 29.36 | 23.7 |
| GSMUA_Achr7P17730_001 | Banana | cytosol, endoplasmic reticulum, plastid | 26.61 | 21.8 |
| GSMUA_Achr5P04340_001 | Banana | cytosol | 29.36 | 20.51 |
| GSMUA_Achr8P26110_001 | Banana | cytosol | 29.36 | 20.38 |
| GSMUA_Achr10P... | Banana | cytosol | 28.44 | 19.02 |
| GSMUA_Achr10P... | Banana | cytosol, plastid | 30.28 | 18.75 |
| GSMUA_Achr7P15330_001 | Banana | plastid | 31.19 | 15.96 |
| GSMUA_Achr2P16130_001 | Banana | mitochondrion, plastid | 31.19 | 15.89 |
| GSMUA_Achr7P10400_001 | Banana | plastid | 29.36 | 15.09 |
| GSMUA_Achr4P30560_001 | Banana | plastid | 26.61 | 15.03 |
| GSMUA_Achr6P34370_001 | Banana | plastid | 30.28 | 14.86 |
| GSMUA_Achr9P03120_001 | Banana | plastid | 28.44 | 13.96 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P17300_001 | EnsemblPlants:GSMUA_Achr6T17300_001 | EnsemblPlantsGene:GSMUA_Achr6G17300_001 | Gene3D:3.30.70.100 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf |
| InterPro:IPR006121 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF271 | PFAM:PF00403 | PFscan:PS50846 | SEG:seg |
| SUPFAM:SSF55008 | UniParc:UPI0002958762 | UniProt:M0T7S8 | MapMan:25.5.2.3 | : | : |
Description
Putative Copper transport protein ATOX1 [Source:GMGC_GENE;Acc:GSMUA_Achr6G17300_001]
Coordinates
chr6:-:11640765..11643837
Molecular Weight (calculated)
11412.4 Da
IEP (calculated)
4.381
GRAVY (calculated)
-0.388
Length
109 amino acids
Sequence
(BLAST)
(BLAST)
001: MAETVVLKVG MSCQGCVGAV KRVLTKMEGV ESFDVDLKEQ KVTVKGNVKP EDVFQTVSKT GKKTSFWEAE PEAKEAAPAT PTKEDAPSAP TEEDAPSAPD
101: AAADVTTAA
101: AAADVTTAA
001: MAQTVVLKVG MSCQGCVGAV NRVLGKMEGV ESFDIDIKEQ KVTVKGNVEP EAVFQTVSKT GKKTSYWPVE AEAEPKAEAD PKVETVTETK TEAETKTEAK
101: VDAKADVEPK AAEAETKPSQ V
101: VDAKADVEPK AAEAETKPSQ V
Arabidopsis Description
CCHCopper transport protein CCH [Source:UniProtKB/Swiss-Prot;Acc:O82089]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.