Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 3
- nucleus 1
- mitochondrion 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g055310.2.1 | Tomato | plastid | 100.0 | 100.0 |
| KRH34745 | Soybean | endoplasmic reticulum | 80.25 | 80.25 |
| VIT_13s0074g00770.t01 | Wine grape | cytosol | 85.19 | 80.23 |
| TraesCS7D01G342900.1 | Wheat | cytosol | 75.31 | 79.22 |
| TraesCS7B01G247000.1 | Wheat | cytosol | 75.31 | 79.22 |
| Os08t0205400-01 | Rice | extracellular, plasma membrane | 76.54 | 76.54 |
| Zm00001d031132_P002 | Maize | cytosol | 77.78 | 75.0 |
| EES17440 | Sorghum | cytosol, plastid | 77.78 | 72.41 |
| GSMUA_Achr10P... | Banana | cytosol | 32.1 | 72.22 |
| GSMUA_Achr6P07500_001 | Banana | cytosol, plastid | 80.25 | 58.04 |
| PGSC0003DMT400050141 | Potato | cytosol, plastid | 75.31 | 57.55 |
| GSMUA_Achr6P17300_001 | Banana | cytosol | 74.07 | 55.05 |
| KRG92037 | Soybean | cytosol | 79.01 | 52.03 |
| Zm00001d016691_P001 | Maize | extracellular | 70.37 | 50.89 |
| TraesCS7D01G429000.1 | Wheat | cytosol | 67.9 | 50.46 |
| TraesCS7A01G439300.1 | Wheat | cytosol | 67.9 | 50.0 |
| EES06905 | Sorghum | cytosol | 69.14 | 49.56 |
| HORVU7Hr1G100230.1 | Barley | cytosol | 67.9 | 49.11 |
| TraesCS7B01G338200.1 | Wheat | cytosol | 59.26 | 44.86 |
| HORVU7Hr1G082540.3 | Barley | cytosol, plastid | 35.8 | 35.8 |
| TraesCS7A01G335400.1 | Wheat | cytosol | 72.84 | 35.33 |
| PGSC0003DMT400032793 | Potato | plastid | 43.21 | 20.83 |
| PGSC0003DMT400001032 | Potato | cytosol | 35.8 | 19.46 |
| PGSC0003DMT400040203 | Potato | cytosol | 43.21 | 13.46 |
| PGSC0003DMT400045359 | Potato | cytosol | 35.8 | 9.67 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400060399 | EnsemblPlantsGene:PGSC0003DMG400023492 | EntrezGene:102580838 | Gene3D:3.30.70.100 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf |
| InterPro:IPR006121 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF172 | PFAM:PF00403 | PFscan:PS50846 | PGSC:PGSC0003DMG400023492 |
| RefSeq:XP_006345865.1 | SUPFAM:SSF55008 | UniParc:UPI000018F518 | UniProt:M1C5S8 | MapMan:25.5.2.3 | : |
Description
Copper chaperone [Source:PGSC_GENE;Acc:PGSC0003DMG400023492]
Coordinates
chr5:+:50982683..50985890
Molecular Weight (calculated)
8547.3 Da
IEP (calculated)
6.557
GRAVY (calculated)
-0.104
Length
81 amino acids
Sequence
(BLAST)
(BLAST)
1: MSQTVVLKVG MSCEGCVGAV KRVLGKMEGV ETFDIDLKEQ KVTVKGNVQP DAVLKTVSKT GKPTSFWEAG ESAQTEAVST A
001: MLKDLFQAVS YQNTASLSLF QALSVVESKA MSQTVVLRVA MTCEGCVGAV KRVLGKMEGV ESFDVDIKEQ KVTVKGNVQP DAVLQTVTKT GKKTAFWEAE
101: GETAKA
101: GETAKA
Arabidopsis Description
ATX1homolog of anti-oxidant 1 [Source:TAIR;Acc:AT1G66240]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.