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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • cytosol 3
  • extracellular 2
  • golgi 2
  • plasma membrane 2
  • endoplasmic reticulum 2
  • vacuole 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, secretory
MultiLoc:cytosol
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:cytosol
extracellular: 20408568
msms PMID: 20408568 doi
W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li
Department of Plant Nutrition, China Agricultural University, Beijing, PR China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES06905 Sorghum cytosol 89.29 88.5
PGSC0003DMT400060399 Potato cytosol, plastid 50.89 70.37
Solyc05g055310.2.1 Tomato plastid 50.89 70.37
TraesCS7A01G439300.1 Wheat cytosol 67.86 69.09
Zm00001d031132_P002 Maize cytosol 51.79 69.05
TraesCS7D01G429000.1 Wheat cytosol 66.96 68.81
HORVU7Hr1G100230.1 Barley cytosol 68.75 68.75
VIT_13s0074g00770.t01 Wine grape cytosol 52.68 68.6
TraesCS7B01G338200.1 Wheat cytosol 62.5 65.42
GSMUA_Achr6P17300_001 Banana cytosol 61.61 63.3
PGSC0003DMT400050141 Potato cytosol, plastid 56.25 59.43
Solyc11g007200.1.1 Tomato extracellular 57.14 56.64
KRH33278 Soybean cytosol 58.04 50.0
KRH71640 Soybean cytosol, mitochondrion, plastid 55.36 47.69
Zm00001d011731_P001 Maize extracellular 30.36 22.97
Zm00001d043615_P001 Maize cytosol 29.46 21.02
Zm00001d011274_P001 Maize mitochondrion 24.11 20.15
Zm00001d034634_P001 Maize plastid 33.04 17.62
Zm00001d012973_P001 Maize plastid 33.04 17.54
Zm00001d040839_P001 Maize nucleus 32.14 10.78
Zm00001d050277_P001 Maize mitochondrion 16.07 9.47
Zm00001d038419_P001 Maize cytosol 18.75 9.25
Protein Annotations
MapMan:25.5.2.3Gene3D:3.30.70.100ProteinID:AQK71482.1UniProt:B6SQL3EMBL:BT055339EMBL:EU955028
GO:GO:0003674GO:GO:0005488GO:GO:0006810GO:GO:0008150GO:GO:0030001GO:GO:0046872
InterPro:HMA_domInterPro:HMA_dom_sfInterPro:IPR006121PFAM:PF00403PFscan:PS50846PANTHER:PTHR22814
PANTHER:PTHR22814:SF73SUPFAM:SSF55008UniParc:UPI000182BB8AEnsemblPlantsGene:Zm00001d016691EnsemblPlants:Zm00001d016691_P001EnsemblPlants:Zm00001d016691_T001
SEG:seg:::::
Description
Copper transport protein CCH
Coordinates
chr5:+:172643939..172645561
Molecular Weight (calculated)
11347.4 Da
IEP (calculated)
4.535
GRAVY (calculated)
-0.104
Length
112 amino acids
Sequence
(BLAST)
001: MAAVETVVLK VAMSCEGCAG AVRRVLSKME GVETFDIDLK EQKVTVKGNV KPEDVFQTVS KSGKRTSYWE GEATAPDAAA ASGAEAAPGT AAEAPPAAAP
101: AAPEITPAKA DA
Best Arabidopsis Sequence Match ( AT3G56240.1 )
(BLAST)
001: MAQTVVLKVG MSCQGCVGAV NRVLGKMEGV ESFDIDIKEQ KVTVKGNVEP EAVFQTVSKT GKKTSYWPVE AEAEPKAEAD PKVETVTETK TEAETKTEAK
101: VDAKADVEPK AAEAETKPSQ V
Arabidopsis Description
CCHCopper transport protein CCH [Source:UniProtKB/Swiss-Prot;Acc:O82089]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.