Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- cytosol 3
- extracellular 2
- golgi 2
- plasma membrane 2
- endoplasmic reticulum 2
- vacuole 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
20408568
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
EES06905 | Sorghum | cytosol | 89.29 | 88.5 |
PGSC0003DMT400060399 | Potato | cytosol, plastid | 50.89 | 70.37 |
Solyc05g055310.2.1 | Tomato | plastid | 50.89 | 70.37 |
TraesCS7A01G439300.1 | Wheat | cytosol | 67.86 | 69.09 |
Zm00001d031132_P002 | Maize | cytosol | 51.79 | 69.05 |
TraesCS7D01G429000.1 | Wheat | cytosol | 66.96 | 68.81 |
HORVU7Hr1G100230.1 | Barley | cytosol | 68.75 | 68.75 |
VIT_13s0074g00770.t01 | Wine grape | cytosol | 52.68 | 68.6 |
TraesCS7B01G338200.1 | Wheat | cytosol | 62.5 | 65.42 |
GSMUA_Achr6P17300_001 | Banana | cytosol | 61.61 | 63.3 |
PGSC0003DMT400050141 | Potato | cytosol, plastid | 56.25 | 59.43 |
Solyc11g007200.1.1 | Tomato | extracellular | 57.14 | 56.64 |
KRH33278 | Soybean | cytosol | 58.04 | 50.0 |
KRH71640 | Soybean | cytosol, mitochondrion, plastid | 55.36 | 47.69 |
Zm00001d011731_P001 | Maize | extracellular | 30.36 | 22.97 |
Zm00001d043615_P001 | Maize | cytosol | 29.46 | 21.02 |
Zm00001d011274_P001 | Maize | mitochondrion | 24.11 | 20.15 |
Zm00001d034634_P001 | Maize | plastid | 33.04 | 17.62 |
Zm00001d012973_P001 | Maize | plastid | 33.04 | 17.54 |
Zm00001d040839_P001 | Maize | nucleus | 32.14 | 10.78 |
Zm00001d050277_P001 | Maize | mitochondrion | 16.07 | 9.47 |
Zm00001d038419_P001 | Maize | cytosol | 18.75 | 9.25 |
Protein Annotations
MapMan:25.5.2.3 | Gene3D:3.30.70.100 | ProteinID:AQK71482.1 | UniProt:B6SQL3 | EMBL:BT055339 | EMBL:EU955028 |
GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 |
InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 | PFAM:PF00403 | PFscan:PS50846 | PANTHER:PTHR22814 |
PANTHER:PTHR22814:SF73 | SUPFAM:SSF55008 | UniParc:UPI000182BB8A | EnsemblPlantsGene:Zm00001d016691 | EnsemblPlants:Zm00001d016691_P001 | EnsemblPlants:Zm00001d016691_T001 |
SEG:seg | : | : | : | : | : |
Description
Copper transport protein CCH
Coordinates
chr5:+:172643939..172645561
Molecular Weight (calculated)
11347.4 Da
IEP (calculated)
4.535
GRAVY (calculated)
-0.104
Length
112 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAVETVVLK VAMSCEGCAG AVRRVLSKME GVETFDIDLK EQKVTVKGNV KPEDVFQTVS KSGKRTSYWE GEATAPDAAA ASGAEAAPGT AAEAPPAAAP
101: AAPEITPAKA DA
101: AAPEITPAKA DA
001: MAQTVVLKVG MSCQGCVGAV NRVLGKMEGV ESFDIDIKEQ KVTVKGNVEP EAVFQTVSKT GKKTSYWPVE AEAEPKAEAD PKVETVTETK TEAETKTEAK
101: VDAKADVEPK AAEAETKPSQ V
101: VDAKADVEPK AAEAETKPSQ V
Arabidopsis Description
CCHCopper transport protein CCH [Source:UniProtKB/Swiss-Prot;Acc:O82089]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.