Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- golgi 2
- plasma membrane 3
- endoplasmic reticulum 2
- vacuole 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G439300.1 | Wheat | cytosol | 93.75 | 95.45 |
| TraesCS7D01G429000.1 | Wheat | cytosol | 89.29 | 91.74 |
| TraesCS7B01G338200.1 | Wheat | cytosol | 82.14 | 85.98 |
| GSMUA_Achr10P... | Banana | cytosol | 24.11 | 75.0 |
| VIT_13s0074g00770.t01 | Wine grape | cytosol | 53.57 | 69.77 |
| Zm00001d016691_P001 | Maize | extracellular | 68.75 | 68.75 |
| PGSC0003DMT400060399 | Potato | cytosol, plastid | 49.11 | 67.9 |
| Solyc05g055310.2.1 | Tomato | plastid | 49.11 | 67.9 |
| EES06905 | Sorghum | cytosol | 66.07 | 65.49 |
| PGSC0003DMT400050141 | Potato | cytosol, plastid | 56.25 | 59.43 |
| Solyc11g007200.1.1 | Tomato | extracellular | 54.46 | 53.98 |
| KRH33278 | Soybean | cytosol | 58.04 | 50.0 |
| KRH71640 | Soybean | cytosol, mitochondrion, plastid | 56.25 | 48.46 |
| HORVU7Hr1G082540.3 | Barley | cytosol, plastid | 21.43 | 29.63 |
| HORVU3Hr1G068200.1 | Barley | cytosol | 29.46 | 23.08 |
| HORVU1Hr1G080800.1 | Barley | mitochondrion | 28.57 | 21.05 |
| HORVU1Hr1G072500.1 | Barley | mitochondrion | 30.36 | 17.71 |
| HORVU5Hr1G112560.1 | Barley | plastid | 32.14 | 17.39 |
| HORVU3Hr1G114920.1 | Barley | cytosol | 32.14 | 10.03 |
Protein Annotations
| MapMan:25.5.2.3 | Gene3D:3.30.70.100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf | EnsemblPlantsGene:HORVU7Hr1G100230 | EnsemblPlants:HORVU7Hr1G100230.1 |
| InterPro:IPR006121 | UniProt:M0WSW2 | PFAM:PF00403 | PFscan:PS50846 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF73 |
| SUPFAM:SSF55008 | UniParc:UPI000295DEFB | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:604233579..604235368
Molecular Weight (calculated)
11303.3 Da
IEP (calculated)
4.370
GRAVY (calculated)
-0.105
Length
112 amino acids
Sequence
(BLAST)
(BLAST)
001: MASETVVLKV AMSCGGCSGA VKRVLTKMEG VESFDIDMEQ QKVTVKGNVK PEDVFQTVSK TGKKTAFWEA EEATPAAGAA APEAAPAAPA PEAAPAADAA
101: PAPEVTPANT TA
101: PAPEVTPANT TA
001: MLKDLFQAVS YQNTASLSLF QALSVVESKA MSQTVVLRVA MTCEGCVGAV KRVLGKMEGV ESFDVDIKEQ KVTVKGNVQP DAVLQTVTKT GKKTAFWEAE
101: GETAKA
101: GETAKA
Arabidopsis Description
ATX1homolog of anti-oxidant 1 [Source:TAIR;Acc:AT1G66240]
SUBAcon: [cytosol,plastid]
SUBAcon: [cytosol,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.