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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • plastid 3
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400060399 Potato cytosol, plastid 35.8 35.8
Solyc05g055310.2.1 Tomato plastid 35.8 35.8
VIT_13s0074g00770.t01 Wine grape cytosol 34.57 32.56
PGSC0003DMT400050141 Potato cytosol, plastid 33.33 25.47
Solyc11g007200.1.1 Tomato extracellular 32.1 23.01
HORVU7Hr1G100230.1 Barley cytosol 29.63 21.43
HORVU3Hr1G068200.1 Barley cytosol 20.99 11.89
HORVU1Hr1G080800.1 Barley mitochondrion 22.22 11.84
HORVU5Hr1G112560.1 Barley plastid 25.93 10.14
HORVU1Hr1G072500.1 Barley mitochondrion 19.75 8.33
HORVU3Hr1G114920.1 Barley cytosol 29.63 6.69
Protein Annotations
EnsemblPlants:HORVU7Hr1G082540.3EnsemblPlantsGene:HORVU7Hr1G082540Gene3D:3.30.70.100GO:GO:0003674GO:GO:0005488GO:GO:0006810
GO:GO:0008150GO:GO:0030001GO:GO:0046872InterPro:HMA_domInterPro:HMA_dom_sfInterPro:IPR006121
PANTHER:PTHR22814PANTHER:PTHR22814:SF172PFAM:PF00403PFscan:PS50846SUPFAM:SSF55008UniParc:UPI000B46EE62
UniProt:A0A287X3X5MapMan:35.2::::
Description
No Description!
Coordinates
chrchr7H:+:496250991..496252813
Molecular Weight (calculated)
8941.9 Da
IEP (calculated)
8.345
GRAVY (calculated)
0.126
Length
81 amino acids
Sequence
(BLAST)
1: LLEPSSSNPS DLIQRFHSPL PLSAPSPFKN QPISRAMSQT VELRVGMSCE GCVGAVKRVL GKMEGCFNSP FIWFSFLFCF S
Best Arabidopsis Sequence Match ( AT1G66240.1 )
(BLAST)
001: MLKDLFQAVS YQNTASLSLF QALSVVESKA MSQTVVLRVA MTCEGCVGAV KRVLGKMEGV ESFDVDIKEQ KVTVKGNVQP DAVLQTVTKT GKKTAFWEAE
101: GETAKA
Arabidopsis Description
ATX1homolog of anti-oxidant 1 [Source:TAIR;Acc:AT1G66240]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.