Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
- cytosol 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G288300.1 | Wheat | cytosol | 93.71 | 93.71 |
| TraesCS3B01G322900.1 | Wheat | cytosol | 93.71 | 93.71 |
| TraesCS3D01G288100.1 | Wheat | cytosol | 93.71 | 93.71 |
| Os01t0719600-01 | Rice | cytosol | 79.02 | 79.58 |
| EES01377 | Sorghum | cytosol | 76.22 | 73.65 |
| Zm00001d043615_P001 | Maize | cytosol | 77.62 | 70.7 |
| GSMUA_Achr1P14500_001 | Banana | cytosol | 61.54 | 65.19 |
| Zm00001d011731_P001 | Maize | extracellular | 67.13 | 64.86 |
| VIT_11s0016g04220.t01 | Wine grape | cytosol | 55.24 | 58.96 |
| KRH48431 | Soybean | cytosol | 53.85 | 57.04 |
| KRH60302 | Soybean | cytosol, extracellular | 52.45 | 56.82 |
| KRH39252 | Soybean | cytosol | 53.15 | 56.3 |
| GSMUA_Achr8P26110_001 | Banana | cytosol | 60.84 | 55.41 |
| HORVU1Hr1G080800.1 | Barley | mitochondrion | 58.04 | 54.61 |
| KRH41596 | Soybean | cytosol | 50.35 | 54.55 |
| PGSC0003DMT400001032 | Potato | cytosol | 53.15 | 51.01 |
| AT3G24450.1 | Thale cress | cytosol | 47.55 | 48.57 |
| Bra001948.1-P | Field mustard | cytosol | 45.45 | 46.43 |
| CDX94814 | Canola | cytosol | 45.45 | 46.43 |
| CDY69094 | Canola | cytosol | 33.57 | 42.86 |
| HORVU7Hr1G100230.1 | Barley | cytosol | 23.08 | 29.46 |
| HORVU1Hr1G072500.1 | Barley | mitochondrion | 39.16 | 29.17 |
| HORVU5Hr1G112560.1 | Barley | plastid | 34.97 | 24.15 |
| HORVU7Hr1G082540.3 | Barley | cytosol, plastid | 11.89 | 20.99 |
| HORVU3Hr1G114920.1 | Barley | cytosol | 37.76 | 15.04 |
Protein Annotations
| EMBL:AK369780 | EnsemblPlants:HORVU3Hr1G068200.1 | EnsemblPlantsGene:HORVU3Hr1G068200 | Gene3D:3.30.70.100 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf |
| InterPro:IPR006121 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF169 | PFAM:PF00403 | PFscan:PS50846 | SEG:seg |
| SignalP:SignalP-noTM | SUPFAM:SSF55008 | UniParc:UPI00020077CD | UniProt:F2E0V9 | MapMan:35.1 | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2E0V9]
Coordinates
chrchr3H:+:517640716..517643657
Molecular Weight (calculated)
15549.0 Da
IEP (calculated)
6.255
GRAVY (calculated)
-0.022
Length
143 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRKLGLDRV LDCFSLAVCA NACVCIQAVE DEDEENEGKA LVSAQLDELL KLKDLGGGAK TLAFHLEPKT VELRVSMHCY GCARKVQKHI SKMEGVSSFE
101: VDLENKKVVV TGDVTPYEVL ASVSKVMKFA ELLVAPKSPP PSR
101: VDLENKKVVV TGDVTPYEVL ASVSKVMKFA ELLVAPKSPP PSR
001: MGKLQKIGRV WDCLFLPTNQ CSCFCLNTLG DEEEEFEKEP LIDSSTEKSG KVMRLKDVVA ADHRQTLAFH LKPKIVELKV SMHCYGCAKK VEKHISKLDG
101: VTWYKVELES KKVVVKGNIL PVDVLESICK VKNAQLWSSP
101: VTWYKVELES KKVVVKGNIL PVDVLESICK VKNAQLWSSP
Arabidopsis Description
Heavy metal transport/detoxification superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LHF4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.