Factsheet for TraesCS3B01G322900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 3
golgi 3
plasma membrane 3
endoplasmic reticulum 3
vacuole 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G288100.1	Wheat	cytosol	95.1	95.1
TraesCS3A01G288300.1	Wheat	cytosol	95.1	95.1
HORVU3Hr1G068200.1	Barley	cytosol	93.71	93.71
Os01t0719600-01	Rice	cytosol	76.92	77.46
EES01377	Sorghum	cytosol	76.92	74.32
Zm00001d043615_P001	Maize	cytosol	78.32	71.34
Zm00001d011731_P001	Maize	extracellular	68.53	66.22
GSMUA_Achr1P14500_001	Banana	cytosol	59.44	62.96
VIT_11s0016g04220.t01	Wine grape	cytosol	54.55	58.21
KRH48431	Soybean	cytosol	54.55	57.78
KRH60302	Soybean	cytosol, extracellular	53.15	57.58
KRH39252	Soybean	cytosol	53.85	57.04
GSMUA_Achr8P26110_001	Banana	cytosol	62.24	56.69
TraesCS1B01G371000.1	Wheat	cytosol, mitochondrion	57.34	56.16
KRH41596	Soybean	cytosol	51.05	55.3
PGSC0003DMT400001032	Potato	cytosol	51.75	49.66
AT3G24450.1	Thale cress	cytosol	47.55	48.57
CDX94814	Canola	cytosol	45.45	46.43
Bra001948.1-P	Field mustard	cytosol	45.45	46.43
TraesCS7B01G247000.1	Wheat	cytosol	24.48	45.45
TraesCS3B01G244200.1	Wheat	mitochondrion	39.86	44.19
CDY69094	Canola	cytosol	33.57	42.86
TraesCS1B01G292800.1	Wheat	cytosol	39.86	30.65
TraesCS7B01G338200.1	Wheat	cytosol	20.28	27.1
TraesCS5B01G488200.1	Wheat	plastid	33.57	22.75
TraesCS3B01G593700.1	Wheat	plastid	37.76	17.59

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0006810	GO:GO:0008150
GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121	PFAM:PF00403
PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF169	SUPFAM:SSF55008	EnsemblPlantsGene:TraesCS3B01G322900	EnsemblPlants:TraesCS3B01G322900.1
TIGR:cd00371	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3B:-:522776519..522778280

Molecular Weight (calculated)

15673.1 Da

IEP (calculated)

6.502

GRAVY (calculated)

-0.092

Length

143 amino acids

Sequence
(BLAST)

001: MGRKLGLDRV MDCFSLSVCA NACVCVHAVE DEDEENEGKA LVSAQLDELL KLKDFGGGAK TLAFHLEPKT VELRVSMHCY GCARKVQKHI SKMEGVSSFE
101: VDLEKKKVVV TGDVTPYEVL QSVSKVMKFA ELLVAPNSPT PSR

Best Arabidopsis Sequence Match ( AT3G24450.1 )
(BLAST)

001: MGKLQKIGRV WDCLFLPTNQ CSCFCLNTLG DEEEEFEKEP LIDSSTEKSG KVMRLKDVVA ADHRQTLAFH LKPKIVELKV SMHCYGCAKK VEKHISKLDG
101: VTWYKVELES KKVVVKGNIL PVDVLESICK VKNAQLWSSP

Arabidopsis Description

Heavy metal transport/detoxification superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LHF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.