CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 2
cytosol 2
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH48431	Soybean	cytosol	96.3	96.3
KRH60302	Soybean	cytosol, extracellular	80.74	82.58
KRH41596	Soybean	cytosol	75.56	77.27
VIT_11s0016g04220.t01	Wine grape	cytosol	68.15	68.66
AT3G24450.1	Thale cress	cytosol	57.78	55.71
GSMUA_Achr1P14500_001	Banana	cytosol	55.56	55.56
Bra001948.1-P	Field mustard	cytosol	57.04	55.0
TraesCS3A01G288300.1	Wheat	cytosol	57.78	54.55
CDX94814	Canola	cytosol	56.3	54.29
TraesCS3D01G288100.1	Wheat	cytosol	57.04	53.85
TraesCS3B01G322900.1	Wheat	cytosol	57.04	53.85
HORVU3Hr1G068200.1	Barley	cytosol	56.3	53.15
PGSC0003DMT400001032	Potato	cytosol	58.52	53.02
Os01t0719600-01	Rice	cytosol	54.81	52.11
CDY69094	Canola	cytosol	42.22	50.89
EES01377	Sorghum	cytosol	55.56	50.68
Zm00001d011731_P001	Maize	extracellular	52.59	47.97
Zm00001d043615_P001	Maize	cytosol	54.81	47.13
GSMUA_Achr8P26110_001	Banana	cytosol	54.07	46.5
KXG22404	Sorghum	extracellular	50.37	45.95
TraesCS1B01G371000.1	Wheat	cytosol, mitochondrion	48.89	45.21
TraesCS1A01G352100.1	Wheat	mitochondrion	47.41	43.24
Os05t0534500-01	Rice	cytosol, mitochondrion	51.11	43.12
HORVU1Hr1G080800.1	Barley	mitochondrion	45.93	40.79
KRH34745	Soybean	endoplasmic reticulum	21.48	35.8
KRH22990	Soybean	cytosol	28.15	28.57
KRH58299	Soybean	mitochondrion	30.37	24.7
KRH42188	Soybean	cytosol, plastid	30.37	24.4
KRG92037	Soybean	cytosol	21.48	23.58
KRH10325	Soybean	plastid	31.85	23.24
KRH43920	Soybean	cytosol	28.15	22.75
KRH71640	Soybean	cytosol, mitochondrion, plastid	21.48	22.31
KRH33278	Soybean	cytosol	21.48	22.31
KRH10507	Soybean	plastid	28.15	22.22
KRH25010	Soybean	plastid	34.07	19.17
KRH29875	Soybean	plastid	32.59	18.33
KRH32346	Soybean	plastid	35.56	17.14
KRH19750	Soybean	plastid	34.07	16.67
KRG95861	Soybean	plastid	34.81	16.21
KRH67578	Soybean	plastid	34.07	15.86

Protein Annotations

EntrezGene:100788037	Gene3D:3.30.70.100	MapMan:35.1	EMBL:ACUP02005925	EnsemblPlantsGene:GLYMA_09G188200	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810
GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0030001	GO:GO:0046872	GO:GO:0046914
GO:GO:0046916	InterPro:HMA_dom	InterPro:HMA_dom_sf	UniProt:I1L4F8	InterPro:IPR006121	EnsemblPlants:KRH39252
ProteinID:KRH39252	ProteinID:KRH39252.1	PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF101
SUPFAM:SSF55008	UniParc:UPI0002338E8E	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:41274625..41276272

Molecular Weight (calculated)

15226.7 Da

IEP (calculated)

8.498

GRAVY (calculated)

-0.119

Length

135 amino acids

Sequence
(BLAST)

001: MGKLRRVLDT FCLSFGSNTC FCMNSMEFED EFEKKPLIVS DSDHKLRLKD VVGGKQTLAF QLKPQIVTLR VSMHCHGCAK KIEKHISKLE GVSSYKVDLE
101: TKIIVVMGDI LPSEVLQSVS KVKNAELFNF QASKE

Best Arabidopsis Sequence Match ( AT3G24450.1 )
(BLAST)

001: MGKLQKIGRV WDCLFLPTNQ CSCFCLNTLG DEEEEFEKEP LIDSSTEKSG KVMRLKDVVA ADHRQTLAFH LKPKIVELKV SMHCYGCAKK VEKHISKLDG
101: VTWYKVELES KKVVVKGNIL PVDVLESICK VKNAQLWSSP

Arabidopsis Description

Heavy metal transport/detoxification superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LHF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.