CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
nucleus 2
mitochondrion 1
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0719600-01	Rice	cytosol	80.41	83.8
Zm00001d043615_P001	Maize	cytosol	88.51	83.44
Zm00001d011731_P001	Maize	extracellular	81.76	81.76
TraesCS3A01G288300.1	Wheat	cytosol	75.0	77.62
TraesCS3D01G288100.1	Wheat	cytosol	74.32	76.92
TraesCS3B01G322900.1	Wheat	cytosol	74.32	76.92
HORVU3Hr1G068200.1	Barley	cytosol	73.65	76.22
GSMUA_Achr1P14500_001	Banana	cytosol	58.11	63.7
VIT_11s0016g04220.t01	Wine grape	cytosol	56.08	61.94
KRH60302	Soybean	cytosol, extracellular	52.7	59.09
KRH48431	Soybean	cytosol	53.38	58.52
KRH41596	Soybean	cytosol	51.35	57.58
KXG22404	Sorghum	extracellular	57.43	57.43
KRH39252	Soybean	cytosol	50.68	55.56
GSMUA_Achr8P26110_001	Banana	cytosol	58.11	54.78
AT3G24450.1	Thale cress	cytosol	50.0	52.86
CDX94814	Canola	cytosol	48.65	51.43
Bra001948.1-P	Field mustard	cytosol	48.65	51.43
PGSC0003DMT400001032	Potato	cytosol	51.35	51.01
OQU87104	Sorghum	cytosol, mitochondrion	42.57	48.46
CDY69094	Canola	cytosol	33.11	43.75
EES17440	Sorghum	cytosol, plastid	22.3	37.93
EER90630	Sorghum	plastid	39.19	27.23
EES06905	Sorghum	cytosol	20.27	26.55
KXG25122	Sorghum	mitochondrion	37.16	26.07
EES02979	Sorghum	mitochondrion, nucleus	37.84	17.13

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.1	EntrezGene:8059190	UniProt:C5XIC4	EnsemblPlants:EES01377	ProteinID:EES01377
ProteinID:EES01377.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0030001
GO:GO:0046872	GO:GO:0046914	GO:GO:0046916	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121
PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF169	EnsemblPlantsGene:SORBI_3003G278700	SUPFAM:SSF55008
unigene:Sbi.9395	UniParc:UPI0001A8483F	RefSeq:XP_002456257.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:+:61476112..61479166

Molecular Weight (calculated)

16517.0 Da

IEP (calculated)

5.692

GRAVY (calculated)

-0.189

Length

148 amino acids

Sequence
(BLAST)

001: MGRTKKLGLD KVLDCFSLSL CSNACACIHS VEEEEDEDER KALVSSQLEE LVKLRDFVDG AAKTLAFHLE PKTVELKVSM HCYGCAKKVQ KHISKMDGVT
101: SFEVDLENKK VVVIGDITPY EVLESISKVK FAELWVAPNS KQQAAERL

Best Arabidopsis Sequence Match ( AT3G24450.1 )
(BLAST)

001: MGKLQKIGRV WDCLFLPTNQ CSCFCLNTLG DEEEEFEKEP LIDSSTEKSG KVMRLKDVVA ADHRQTLAFH LKPKIVELKV SMHCYGCAKK VEKHISKLDG
101: VTWYKVELES KKVVVKGNIL PVDVLESICK VKNAQLWSSP

Arabidopsis Description

Heavy metal transport/detoxification superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LHF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.