Factsheet for VIT_11s0016g04220.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 3
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH60302	Soybean	cytosol, extracellular	70.15	71.21
KRH48431	Soybean	cytosol	71.64	71.11
KRH41596	Soybean	cytosol	67.91	68.94
KRH39252	Soybean	cytosol	68.66	68.15
GSMUA_Achr1P14500_001	Banana	cytosol	64.18	63.7
PGSC0003DMT400001032	Potato	cytosol	69.4	62.42
AT3G24450.1	Thale cress	cytosol	61.19	58.57
Os01t0719600-01	Rice	cytosol	61.94	58.45
Bra001948.1-P	Field mustard	cytosol	59.7	57.14
CDX94814	Canola	cytosol	59.7	57.14
EES01377	Sorghum	cytosol	61.94	56.08
HORVU3Hr1G068200.1	Barley	cytosol	58.96	55.24
TraesCS3A01G288300.1	Wheat	cytosol	58.96	55.24
TraesCS3D01G288100.1	Wheat	cytosol	58.21	54.55
TraesCS3B01G322900.1	Wheat	cytosol	58.21	54.55
KXG22404	Sorghum	extracellular	59.7	54.05
Zm00001d011731_P001	Maize	extracellular	59.7	54.05
TraesCS1B01G371000.1	Wheat	cytosol, mitochondrion	57.46	52.74
TraesCS1A01G352100.1	Wheat	mitochondrion	57.46	52.03
GSMUA_Achr8P26110_001	Banana	cytosol	60.45	51.59
Zm00001d043615_P001	Maize	cytosol	59.7	50.96
CDY69094	Canola	cytosol	41.79	50.0
HORVU1Hr1G080800.1	Barley	mitochondrion	54.48	48.03
Os05t0534500-01	Rice	cytosol, mitochondrion	56.72	47.5
VIT_13s0074g00770.t01	Wine grape	cytosol	21.64	33.72
VIT_12s0055g00930.t01	Wine grape	plastid	37.31	29.94
VIT_08s0040g02700.t01	Wine grape	cytosol, plastid	41.79	20.74
VIT_06s0004g04030.t01	Wine grape	plastid	35.82	20.43

Protein Annotations

EntrezGene:100244080	wikigene:100244080	Gene3D:3.30.70.100	MapMan:35.1	ProteinID:CBI28101	ProteinID:CBI28101.3
UniProt:D7TBR6	EMBL:FN595756	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725
GO:GO:0030001	GO:GO:0046872	GO:GO:0046914	GO:GO:0046916	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:IPR006121	EntrezGene:LOC100244080	wikigene:LOC100244080	PFAM:PF00403	PFscan:PS50846	PFscan:PS51257
PANTHER:PTHR22814	PANTHER:PTHR22814:SF101	SUPFAM:SSF55008	UniParc:UPI00015C862F	ArrayExpress:VIT_11s0016g04220	EnsemblPlantsGene:VIT_11s0016g04220
EnsemblPlants:VIT_11s0016g04220.t01	RefSeq:XP_002284677	RefSeq:XP_002284677.1	RefSeq:XP_010656353.1	:	:

Description

No Description!

Coordinates

chr11:+:3514533..3516082

Molecular Weight (calculated)

14993.5 Da

IEP (calculated)

7.777

GRAVY (calculated)

0.054

Length

134 amino acids

Sequence
(BLAST)

001: MGKLSFGRVL DCFCLSSGST SCFCINSLEA QDEFERKPLI VSDDDRQLVR LKDVIAEKQT LAFQLKPKMV VLRVSMHCNG CARKVEKHIS KMEGVTSYQV
101: DLESKMVVVV GDIVPLEVLE SVSKVKVAEL WKTP

Best Arabidopsis Sequence Match ( AT3G24450.1 )
(BLAST)

001: MGKLQKIGRV WDCLFLPTNQ CSCFCLNTLG DEEEEFEKEP LIDSSTEKSG KVMRLKDVVA ADHRQTLAFH LKPKIVELKV SMHCYGCAKK VEKHISKLDG
101: VTWYKVELES KKVVVKGNIL PVDVLESICK VKNAQLWSSP

Arabidopsis Description

Heavy metal transport/detoxification superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LHF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.