Factsheet for GSMUA_Achr8P26110_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
plasma membrane 1
cytosol 3
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P14500_001	Banana	cytosol	68.79	80.0
TraesCS3B01G322900.1	Wheat	cytosol	56.69	62.24
TraesCS3A01G288300.1	Wheat	cytosol	55.41	60.84
HORVU3Hr1G068200.1	Barley	cytosol	55.41	60.84
TraesCS3D01G288100.1	Wheat	cytosol	55.41	60.84
Os01t0719600-01	Rice	cytosol	54.78	60.56
VIT_11s0016g04220.t01	Wine grape	cytosol	51.59	60.45
EES01377	Sorghum	cytosol	54.78	58.11
KRH60302	Soybean	cytosol, extracellular	47.77	56.82
KRH48431	Soybean	cytosol	48.41	56.3
Zm00001d011731_P001	Maize	extracellular	52.87	56.08
KRH41596	Soybean	cytosol	45.86	54.55
KRH39252	Soybean	cytosol	46.5	54.07
Zm00001d043615_P001	Maize	cytosol	53.5	53.5
KXG22404	Sorghum	extracellular	50.32	53.38
PGSC0003DMT400001032	Potato	cytosol	48.41	51.01
AT3G24450.1	Thale cress	cytosol	45.22	50.71
Bra001948.1-P	Field mustard	cytosol	43.95	49.29
CDX94814	Canola	cytosol	43.95	49.29
Os05t0534500-01	Rice	cytosol, mitochondrion	49.68	48.75
TraesCS1B01G371000.1	Wheat	cytosol, mitochondrion	45.22	48.63
HORVU1Hr1G080800.1	Barley	mitochondrion	46.5	48.03
TraesCS1A01G352100.1	Wheat	mitochondrion	43.95	46.62
CDY69094	Canola	cytosol	29.94	41.96
GSMUA_Achr10P...	Banana	cytosol	8.92	38.89
GSMUA_Achr7P17730_001	Banana	cytosol, endoplasmic reticulum, plastid	30.57	36.09
GSMUA_Achr10P...	Banana	cytosol	33.12	31.9
GSMUA_Achr6P07500_001	Banana	cytosol, plastid	21.66	30.36
GSMUA_Achr5P04340_001	Banana	cytosol	29.94	30.13
GSMUA_Achr6P17300_001	Banana	cytosol	20.38	29.36
GSMUA_Achr4P30560_001	Banana	plastid	33.12	26.94
GSMUA_Achr10P...	Banana	cytosol, plastid	29.94	26.7
GSMUA_Achr7P15330_001	Banana	plastid	33.12	24.41
GSMUA_Achr6P34370_001	Banana	plastid	34.39	24.32
GSMUA_Achr2P16130_001	Banana	mitochondrion, plastid	32.48	23.83
GSMUA_Achr7P10400_001	Banana	plastid	31.85	23.58
GSMUA_Achr9P03120_001	Banana	plastid	32.48	22.97

Protein Annotations

EnsemblPlants:GSMUA_Achr8P26110_001	EnsemblPlants:GSMUA_Achr8T26110_001	EnsemblPlantsGene:GSMUA_Achr8G26110_001	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488
GO:GO:0006810	GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:IPR006121	PANTHER:PTHR22814	PANTHER:PTHR22814:SF101	PFAM:PF00403	PFscan:PS50846	SEG:seg
SUPFAM:SSF55008	UniParc:UPI0002966BD0	UniProt:M0TTR4	MapMan:35.1	:	:

Description

heavy metal-associated domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G26110_001]

Coordinates

chr8:-:29780601..29782044

Molecular Weight (calculated)

17233.1 Da

IEP (calculated)

8.499

GRAVY (calculated)

-0.011

Length

157 amino acids

Sequence
(BLAST)

001: MVDAWKFSAG SSKLLGSCGG CSSGRTERSG WKIIMDCFSL AVSPNSCVCV KTQEEEDGLE RKSLIKSHVE QVLKIKDVLD GAKTLAFHLE PKTVVLKVSM
101: HCNGCARKIE KHISKMEGVS SFKVDLEKKK VVVVGDITPF EVLESVSKVK FAELWLA

Best Arabidopsis Sequence Match ( AT3G24450.1 )
(BLAST)

001: MGKLQKIGRV WDCLFLPTNQ CSCFCLNTLG DEEEEFEKEP LIDSSTEKSG KVMRLKDVVA ADHRQTLAFH LKPKIVELKV SMHCYGCAKK VEKHISKLDG
101: VTWYKVELES KKVVVKGNIL PVDVLESICK VKNAQLWSSP

Arabidopsis Description

Heavy metal transport/detoxification superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LHF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.