Factsheet for GSMUA_Achr7P10400_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P30560_001	Banana	plastid	58.49	64.25
GSMUA_Achr2P16130_001	Banana	mitochondrion, plastid	60.85	60.28
GSMUA_Achr6P34370_001	Banana	plastid	56.6	54.05
GSMUA_Achr9P03120_001	Banana	plastid	54.25	51.8
GSMUA_Achr10P...	Banana	cytosol, plastid	34.43	41.48
GSMUA_Achr7P15330_001	Banana	plastid	41.51	41.31
Zm00001d034634_P001	Maize	plastid	39.62	40.0
GSMUA_Achr10P...	Banana	cytosol	6.6	38.89
GSMUA_Achr1P14500_001	Banana	cytosol	24.53	38.52
EER90630	Sorghum	plastid	38.21	38.03
Zm00001d012973_P001	Maize	plastid	37.74	37.91
Os03t0819400-01	Rice	plastid	35.38	36.95
PGSC0003DMT400040203	Potato	cytosol	43.87	35.77
GSMUA_Achr6P07500_001	Banana	cytosol, plastid	18.87	35.71
Solyc11g073020.1.1	Tomato	cytosol	43.4	35.66
GSMUA_Achr10P...	Banana	cytosol	27.36	35.58
VIT_08s0040g02700.t01	Wine grape	cytosol, plastid	45.28	35.56
HORVU5Hr1G112560.1	Barley	plastid	33.96	34.78
GSMUA_Achr5P04340_001	Banana	cytosol	25.47	34.62
TraesCS5A01G475200.1	Wheat	plastid	33.96	34.45
TraesCS5B01G488200.1	Wheat	plastid	33.96	34.12
KRH19750	Soybean	plastid	43.87	33.7
KRG95861	Soybean	plastid	45.75	33.45
KRH67578	Soybean	plastid	45.28	33.1
GSMUA_Achr7P17730_001	Banana	cytosol, endoplasmic reticulum, plastid	20.75	33.08
KRH32346	Soybean	plastid	42.92	32.5
GSMUA_Achr8P26110_001	Banana	cytosol	23.58	31.85
CDY67353	Canola	cytosol, plastid	37.74	31.37
Bra007008.1-P	Field mustard	cytosol, plastid	37.26	30.98
CDX73547	Canola	cytosol, plastid	36.79	30.83
Bra003142.1-P	Field mustard	cytosol, plastid	35.85	30.52
AT2G37390.1	Thale cress	cytosol	37.26	30.5
Bra005201.1-P	Field mustard	cytosol	38.68	30.48
CDX93383	Canola	cytosol	38.21	30.45
CDX91358	Canola	cytosol	38.68	30.26
AT3G53530.2	Thale cress	cytosol, plastid	35.38	30.24
CDY18449	Canola	cytosol	38.21	30.22
Bra017191.1-P	Field mustard	cytosol	37.74	30.19
CDX74966	Canola	cytosol	38.68	30.15
CDY07583	Canola	cytosol	34.43	30.04
CDY52751	Canola	cytosol	35.38	30.0
GSMUA_Achr6P17300_001	Banana	cytosol	15.09	29.36
CDY68400	Canola	plastid	38.68	28.18
CDY04859	Canola	cytosol	38.68	26.89
AT5G02600.1	Thale cress	plastid	38.68	25.71
Bra028868.1-P	Field mustard	cytosol, plastid	34.91	25.61
Zm00001d038419_P001	Maize	cytosol	25.94	24.23
CDY10437	Canola	cytosol, plastid	35.85	23.97
Bra009578.1-P	Field mustard	cytosol, plastid	35.85	23.1

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0006810	GO:GO:0008150
GO:GO:0030001	GO:GO:0046872	EnsemblPlantsGene:GSMUA_Achr7G10400_001	EnsemblPlants:GSMUA_Achr7P10400_001	EnsemblPlants:GSMUA_Achr7T10400_001	InterPro:HMA_dom
InterPro:HMA_dom_sf	InterPro:IPR006121	UniProt:M0TGC8	PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814
PANTHER:PTHR22814:SF82	SUPFAM:SSF55008	UniParc:UPI000295786D	SEG:seg	:	:

Description

Putative heavy metal-associated domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G10400_001]

Coordinates

chr7:-:8419868..8420720

Molecular Weight (calculated)

22661.0 Da

IEP (calculated)

11.236

GRAVY (calculated)

-0.468

Length

212 amino acids

Sequence
(BLAST)

001: MKGVNFPCAS PASAAICTSV GRRSMVRGSA GRAIDRHTPH LGDPRRAKAA LDSVSHAPTR TKSHFQTSRE SPREPTGRSS HPGSSRGLLD DDAFDVFPSV
101: GTAAPVTSAD PSSLQGAKKD ESAMEVFSKV VHLRVSLHCK CCERKVRKHV SKMEGVTSFN IDLATKKVTV MGEVTPLGVL SSVSKVKNAQ LWRSPPRSSS
201: SSRSKLASLG RR

Best Arabidopsis Sequence Match ( AT2G37390.1 )
(BLAST)

001: MKGRMFCASQ ASTAICSSMD HVHKSTTTDE DERNSGRAID RHNPIIKDGR RSFADDFIKL PTSAEDGEMS NKKLEIYKGR RSITGRRSTG GGGGGGAAAL
101: LKLITNDIGL ARKSFSCVAR PACDLIKTPV GSTRYLLGSD PDSITGSVDQ DPAKTVEAEA PAGEDKTLTE KKTTCGDTDQ QVVVLKVSLH CRGCEGKVRK
201: HLARMQGVTS FNIDFAAKKV TVTGDITPLE ILDSISKVKN AQFWTNPTIP KPNVETQNP

Arabidopsis Description

NAKR2Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q58FZ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.