Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74966 | Canola | cytosol | 96.68 | 96.32 |
| Bra005201.1-P | Field mustard | cytosol | 94.46 | 95.17 |
| CDY18449 | Canola | cytosol | 79.34 | 80.22 |
| CDX93383 | Canola | cytosol | 78.23 | 79.7 |
| AT2G37390.1 | Thale cress | cytosol | 74.91 | 78.38 |
| CDY07583 | Canola | cytosol | 51.66 | 57.61 |
| CDY52751 | Canola | cytosol | 52.77 | 57.2 |
| CDY67353 | Canola | cytosol, plastid | 52.4 | 55.69 |
| CDX73547 | Canola | cytosol, plastid | 50.55 | 54.15 |
| GSMUA_Achr4P30560_001 | Banana | plastid | 33.21 | 46.63 |
| GSMUA_Achr9P03120_001 | Banana | plastid | 35.42 | 43.24 |
| CDY04920 | Canola | cytosol, plastid | 12.18 | 42.86 |
| GSMUA_Achr6P34370_001 | Banana | plastid | 34.69 | 42.34 |
| GSMUA_Achr2P16130_001 | Banana | mitochondrion, plastid | 32.47 | 41.12 |
| CDY00957 | Canola | cytosol, plastid | 11.44 | 40.79 |
| GSMUA_Achr10P... | Banana | cytosol, plastid | 26.2 | 40.34 |
| CDY55410 | Canola | cytosol | 18.82 | 40.16 |
| VIT_08s0040g02700.t01 | Wine grape | cytosol, plastid | 39.85 | 40.0 |
| KRH19750 | Soybean | plastid | 40.59 | 39.86 |
| CDY08589 | Canola | cytosol, plastid | 11.07 | 39.47 |
| KRH67578 | Soybean | plastid | 42.07 | 39.31 |
| KRG95861 | Soybean | plastid | 42.07 | 39.31 |
| KRH32346 | Soybean | plastid | 40.59 | 39.29 |
| Zm00001d034634_P001 | Maize | plastid | 30.26 | 39.05 |
| Os03t0819400-01 | Rice | plastid | 29.15 | 38.92 |
| GSMUA_Achr7P10400_001 | Banana | plastid | 30.26 | 38.68 |
| EER90630 | Sorghum | plastid | 30.26 | 38.5 |
| GSMUA_Achr7P15330_001 | Banana | plastid | 30.26 | 38.5 |
| Zm00001d012973_P001 | Maize | plastid | 29.52 | 37.91 |
| TraesCS5B01G488200.1 | Wheat | plastid | 29.15 | 37.44 |
| PGSC0003DMT400045359 | Potato | cytosol | 41.33 | 37.33 |
| TraesCS5A01G475200.1 | Wheat | plastid | 28.78 | 37.32 |
| HORVU5Hr1G112560.1 | Barley | plastid | 28.41 | 37.2 |
| Solyc10g085910.1.1 | Tomato | nucleus | 40.22 | 36.7 |
| CDY68400 | Canola | plastid | 36.16 | 33.68 |
| CDY04859 | Canola | cytosol | 34.32 | 30.49 |
| CDY71670 | Canola | cytosol | 11.81 | 30.48 |
| CDX72154 | Canola | cytosol | 11.81 | 30.48 |
| CDX94814 | Canola | cytosol | 15.5 | 30.0 |
| CDY14145 | Canola | cytosol, mitochondrion, peroxisome, plastid | 12.18 | 27.97 |
| CDX77196 | Canola | plastid | 26.94 | 27.55 |
| CDY10437 | Canola | cytosol, plastid | 32.1 | 27.44 |
| CDY31723 | Canola | plastid | 26.57 | 27.17 |
| CDY55409 | Canola | nucleus | 14.39 | 26.9 |
| CDX67640 | Canola | cytosol | 11.81 | 25.4 |
| Zm00001d038419_P001 | Maize | cytosol | 20.3 | 24.23 |
| CDX76052 | Canola | cytosol | 11.81 | 23.19 |
| CDY69094 | Canola | cytosol | 9.23 | 22.32 |
| CDY43346 | Canola | cytosol | 11.44 | 18.24 |
| CDY32007 | Canola | plastid | 12.18 | 17.84 |
Protein Annotations
| Gene3D:3.30.70.100 | MapMan:35.1 | GO:A0A078DVV3 | EnsemblPlants:CDX91358 | ProteinID:CDX91358 | ProteinID:CDX91358.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 |
| EnsemblPlantsGene:GSBRNA2T00152650001 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 | PFAM:PF00403 | PFscan:PS50846 |
| PANTHER:PTHR22814 | PANTHER:PTHR22814:SF82 | SUPFAM:SSF55008 | UniParc:UPI0004EB16A8 | SEG:seg | : |
Description
BnaC04g07920D
Coordinates
chrLK031867:+:241773..243025
Molecular Weight (calculated)
28675.2 Da
IEP (calculated)
9.543
GRAVY (calculated)
-0.396
Length
271 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGPMFCASQ ASTAICSSMD HIHKPTTVTV ADKDDKSSGR AIDRHNPIIK DGRRSTADDY IRIPASPADG EISNKALENS KGRRSFTGRT STGGGGGAAA
101: LLKLITSDMS LARKSFSCVA RPACDLTKTP PGSTRYLLGS DPVSLTGSAG QDPVKAVAPS PKPPASEEIM PVSSLTEEKT SGEGGSDQEE KQVVVLKVSL
201: HCRGCEAKVR KHLSRMQGVT SFNIDFAAKK VTVTGDITPL EILDSISKVK NAQFWTTPTV LPLPNLQTPK P
101: LLKLITSDMS LARKSFSCVA RPACDLTKTP PGSTRYLLGS DPVSLTGSAG QDPVKAVAPS PKPPASEEIM PVSSLTEEKT SGEGGSDQEE KQVVVLKVSL
201: HCRGCEAKVR KHLSRMQGVT SFNIDFAAKK VTVTGDITPL EILDSISKVK NAQFWTTPTV LPLPNLQTPK P
001: MKGRMFCASQ ASTAICSSMD HVHKSTTTDE DERNSGRAID RHNPIIKDGR RSFADDFIKL PTSAEDGEMS NKKLEIYKGR RSITGRRSTG GGGGGGAAAL
101: LKLITNDIGL ARKSFSCVAR PACDLIKTPV GSTRYLLGSD PDSITGSVDQ DPAKTVEAEA PAGEDKTLTE KKTTCGDTDQ QVVVLKVSLH CRGCEGKVRK
201: HLARMQGVTS FNIDFAAKKV TVTGDITPLE ILDSISKVKN AQFWTNPTIP KPNVETQNP
101: LKLITNDIGL ARKSFSCVAR PACDLIKTPV GSTRYLLGSD PDSITGSVDQ DPAKTVEAEA PAGEDKTLTE KKTTCGDTDQ QVVVLKVSLH CRGCEGKVRK
201: HLARMQGVTS FNIDFAAKKV TVTGDITPLE ILDSISKVKN AQFWTNPTIP KPNVETQNP
Arabidopsis Description
NAKR2Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q58FZ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.