Factsheet for HORVU5Hr1G112560.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
extracellular 1
mitochondrion 1
cytosol 2
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G475200.1	Wheat	plastid	91.3	90.43
TraesCS5B01G488200.1	Wheat	plastid	91.3	89.57
Os03t0819400-01	Rice	plastid	71.98	73.4
Zm00001d034634_P001	Maize	plastid	69.08	68.1
Zm00001d012973_P001	Maize	plastid	68.6	67.3
EER90630	Sorghum	plastid	68.12	66.2
GSMUA_Achr7P15330_001	Banana	plastid	42.51	41.31
GSMUA_Achr4P30560_001	Banana	plastid	37.68	40.41
Zm00001d038419_P001	Maize	cytosol	41.55	37.89
GSMUA_Achr2P16130_001	Banana	mitochondrion, plastid	39.13	37.85
GSMUA_Achr6P34370_001	Banana	plastid	40.58	37.84
GSMUA_Achr9P03120_001	Banana	plastid	39.61	36.94
GSMUA_Achr10P...	Banana	cytosol, plastid	31.4	36.93
HORVU3Hr1G068200.1	Barley	cytosol	24.15	34.97
HORVU1Hr1G080800.1	Barley	mitochondrion	25.6	34.87
GSMUA_Achr7P10400_001	Banana	plastid	34.78	33.96
HORVU7Hr1G100230.1	Barley	cytosol	17.39	32.14
VIT_08s0040g02700.t01	Wine grape	cytosol, plastid	41.06	31.48
AT2G37390.1	Thale cress	cytosol	38.65	30.89
CDY52751	Canola	cytosol	36.23	30.0
Bra003142.1-P	Field mustard	cytosol, plastid	35.75	29.72
KRH19750	Soybean	plastid	39.61	29.71
KRH67578	Soybean	plastid	41.55	29.66
CDY07583	Canola	cytosol	34.78	29.63
KRH32346	Soybean	plastid	39.61	29.29
CDX73547	Canola	cytosol, plastid	35.75	29.25
AT3G53530.2	Thale cress	cytosol, plastid	34.78	29.03
CDY67353	Canola	cytosol, plastid	35.75	29.02
KRG95861	Soybean	plastid	40.58	28.97
CDX93383	Canola	cytosol	37.2	28.95
CDY18449	Canola	cytosol	37.2	28.73
HORVU1Hr1G072500.1	Barley	mitochondrion	26.57	28.65
Bra007008.1-P	Field mustard	cytosol, plastid	35.27	28.63
CDX91358	Canola	cytosol	37.2	28.41
Bra017191.1-P	Field mustard	cytosol	36.23	28.3
CDX74966	Canola	cytosol	36.72	27.94
Bra005201.1-P	Field mustard	cytosol	35.27	27.14
Solyc10g085910.1.1	Tomato	nucleus	38.65	26.94
HORVU3Hr1G114920.1	Barley	cytosol	46.38	26.74
CDY68400	Canola	plastid	37.2	26.46
PGSC0003DMT400045359	Potato	cytosol	37.68	26.0
HORVU7Hr1G082540.3	Barley	cytosol, plastid	10.14	25.93
CDY04859	Canola	cytosol	35.27	23.93
AT5G02600.1	Thale cress	plastid	36.72	23.82
Bra028868.1-P	Field mustard	cytosol, plastid	31.4	22.49
CDY10437	Canola	cytosol, plastid	34.3	22.4
Bra009578.1-P	Field mustard	cytosol, plastid	34.3	21.58

Protein Annotations

EMBL:AK358871	EnsemblPlants:HORVU5Hr1G112560.1	EnsemblPlantsGene:HORVU5Hr1G112560	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488
GO:GO:0006810	GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:IPR006121	PANTHER:PTHR22814	PANTHER:PTHR22814:SF82	PFAM:PF00403	PFscan:PS50846	SEG:seg
SUPFAM:SSF55008	UniParc:UPI0002005659	UniProt:F2D4R1	MapMan:35.1	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2D4R1]

Coordinates

chrchr5H:+:639725959..639727668

Molecular Weight (calculated)

21594.1 Da

IEP (calculated)

10.178

GRAVY (calculated)

-0.153

Length

207 amino acids

Sequence
(BLAST)

001: MAPLLFKDMR SLSCSSPAST AICPSLERQP IFRPQKPGAS PLFQVVPAEP RAHRQDGKKG HHHHHRPGAA KGDLVSPAGS SRFLLSGCAA VDEIQEVATA
101: PPAAAPGGDV RREEPAAAAD VKSTDSTQEQ VVVLKVSLHC KACAGKVKKH LAKMEGVRTF SIDFAAKKVT VVGAVTPLGV LASVSKVKNA QIWEAAPAPP
201: PQPAMAA

Best Arabidopsis Sequence Match ( AT2G37390.2 )
(BLAST)

001: MKGRMFCASQ ASTAICSSMD HVHKSTTTDE DERNSGRAID RHNPIIKDGR RSFADDFIKL PTSAEDGEMS NKKLEIYKGR RSITGRRSTG GGGGGGAAAL
101: LKLITNDIGL ARKSFSCVAR PACDLIKTPV GSTRYLLGSD PDSITGSVDQ DPAKTVEAEA PAGEDKTLTE KKTTCGDTDQ VVVLKVSLHC RGCEGKVRKH
201: LARMQGVTSF NIDFAAKKVT VTGDITPLEI LDSISKVKNA QFWTNPTIPK PNVETQNP

Arabidopsis Description

NAKR2Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q58FZ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.