Factsheet for Bra005201.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
cytosol 2
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74966	Canola	cytosol	97.03	95.96
CDX91358	Canola	cytosol	95.17	94.46
Bra017191.1-P	Field mustard	cytosol	77.32	78.49
AT2G37390.1	Thale cress	cytosol	72.12	74.9
Bra003142.1-P	Field mustard	cytosol, plastid	51.67	55.82
Bra007008.1-P	Field mustard	cytosol, plastid	50.93	53.73
GSMUA_Achr4P30560_001	Banana	plastid	32.34	45.08
GSMUA_Achr9P03120_001	Banana	plastid	34.94	42.34
GSMUA_Achr6P34370_001	Banana	plastid	34.94	42.34
GSMUA_Achr2P16130_001	Banana	mitochondrion, plastid	31.97	40.19
GSMUA_Achr10P...	Banana	cytosol, plastid	26.02	39.77
Bra029854.1-P	Field mustard	cytosol, plastid	11.15	39.47
VIT_08s0040g02700.t01	Wine grape	cytosol, plastid	39.03	38.89
KRH19750	Soybean	plastid	39.78	38.77
GSMUA_Achr7P10400_001	Banana	plastid	30.48	38.68
KRH67578	Soybean	plastid	41.26	38.28
KRG95861	Soybean	plastid	41.26	38.28
KRH32346	Soybean	plastid	39.78	38.21
Zm00001d034634_P001	Maize	plastid	29.74	38.1
GSMUA_Achr7P15330_001	Banana	plastid	29.74	37.56
EER90630	Sorghum	plastid	29.74	37.56
Os03t0819400-01	Rice	plastid	28.25	37.44
Zm00001d012973_P001	Maize	plastid	28.62	36.49
PGSC0003DMT400045359	Potato	cytosol	40.15	36.0
Solyc10g085910.1.1	Tomato	nucleus	39.03	35.35
HORVU5Hr1G112560.1	Barley	plastid	27.14	35.27
TraesCS5A01G475200.1	Wheat	plastid	27.14	34.93
TraesCS5B01G488200.1	Wheat	plastid	27.14	34.6
Bra007230.1-P	Field mustard	cytosol, plastid	12.27	31.13
Bra001948.1-P	Field mustard	cytosol	15.24	29.29
Bra028868.1-P	Field mustard	cytosol, plastid	30.48	28.37
Bra035681.1-P	Field mustard	plastid	26.77	27.17
Bra009578.1-P	Field mustard	cytosol, plastid	32.34	26.44
Bra003234.1-P	Field mustard	cytosol, plastid	11.52	24.41
Zm00001d038419_P001	Maize	cytosol	20.45	24.23
Bra014702.1-P	Field mustard	cytosol	11.52	18.79

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.1	EnsemblPlantsGene:Bra005201	EnsemblPlants:Bra005201.1	EnsemblPlants:Bra005201.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0006810	GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom
InterPro:HMA_dom_sf	InterPro:IPR006121	UniProt:M4CLW4	PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814
PANTHER:PTHR22814:SF82	SUPFAM:SSF55008	UniParc:UPI00025479A5	SEG:seg	:	:

Description

AT2G37390 (E=2e-085) | heavy-metal-associated domain-containing protein

Coordinates

chrA05:-:3969393..3970638

Molecular Weight (calculated)

28493.0 Da

IEP (calculated)

9.360

GRAVY (calculated)

-0.438

Length

269 amino acids

Sequence
(BLAST)

001: MKGPMFCASQ ASTAICSSMD HIHKPTTVTV ADKDDKSSGR AIDRHNPIIK DGRRSTADDY IRIPASPADG EISNKALENS KGRRSFTGRK STGGGGGAAA
101: LLKLITSDMS LARKSFSCVA RPACDLTKTP PGSTRYLLGS DPVALNGSAG QDPVKAEASS PKPPPSEEIE PVSSMTEEKS CGGSDQEEKQ VVVLKVSLHC
201: RGCEAKVRKH LSRMQGVTSF NIDFAAKKVT VTGNITPLEI LDSISKVKNA QFCTTPTVLP LPNLQTPKP

Best Arabidopsis Sequence Match ( AT2G37390.1 )
(BLAST)

001: MKGRMFCASQ ASTAICSSMD HVHKSTTTDE DERNSGRAID RHNPIIKDGR RSFADDFIKL PTSAEDGEMS NKKLEIYKGR RSITGRRSTG GGGGGGAAAL
101: LKLITNDIGL ARKSFSCVAR PACDLIKTPV GSTRYLLGSD PDSITGSVDQ DPAKTVEAEA PAGEDKTLTE KKTTCGDTDQ QVVVLKVSLH CRGCEGKVRK
201: HLARMQGVTS FNIDFAAKKV TVTGDITPLE ILDSISKVKN AQFWTNPTIP KPNVETQNP

Arabidopsis Description

NAKR2Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q58FZ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.