Factsheet for GSMUA_Achr7P15330_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2
nucleus 1
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P30560_001	Banana	plastid	45.07	49.74
GSMUA_Achr9P03120_001	Banana	plastid	51.64	49.55
GSMUA_Achr2P16130_001	Banana	mitochondrion, plastid	49.77	49.53
GSMUA_Achr6P34370_001	Banana	plastid	50.23	48.2
Os03t0819400-01	Rice	plastid	42.25	44.34
HORVU5Hr1G112560.1	Barley	plastid	41.31	42.51
Zm00001d034634_P001	Maize	plastid	41.31	41.9
EER90630	Sorghum	plastid	41.78	41.78
GSMUA_Achr7P10400_001	Banana	plastid	41.31	41.51
Zm00001d012973_P001	Maize	plastid	40.38	40.76
TraesCS5B01G488200.1	Wheat	plastid	39.91	40.28
TraesCS5A01G475200.1	Wheat	plastid	39.44	40.19
GSMUA_Achr1P14500_001	Banana	cytosol	25.35	40.0
GSMUA_Achr10P...	Banana	cytosol	30.52	39.88
GSMUA_Achr10P...	Banana	cytosol, plastid	32.39	39.2
GSMUA_Achr5P04340_001	Banana	cytosol	28.17	38.46
GSMUA_Achr7P17730_001	Banana	cytosol, endoplasmic reticulum, plastid	23.47	37.59
PGSC0003DMT400040203	Potato	cytosol	44.13	36.15
GSMUA_Achr10P...	Banana	cytosol	6.1	36.11
Solyc11g073020.1.1	Tomato	cytosol	43.19	35.66
GSMUA_Achr6P07500_001	Banana	cytosol, plastid	18.31	34.82
VIT_08s0040g02700.t01	Wine grape	cytosol, plastid	43.66	34.44
GSMUA_Achr8P26110_001	Banana	cytosol	24.41	33.12
KRH19750	Soybean	plastid	42.72	32.97
Bra003142.1-P	Field mustard	cytosol, plastid	38.5	32.93
AT3G53530.2	Thale cress	cytosol, plastid	38.03	32.66
KRG95861	Soybean	plastid	44.13	32.41
KRH67578	Soybean	plastid	44.13	32.41
CDY52751	Canola	cytosol	38.03	32.4
KRH32346	Soybean	plastid	42.25	32.14
CDY07583	Canola	cytosol	36.62	32.1
AT2G37390.1	Thale cress	cytosol	38.5	31.66
CDY18449	Canola	cytosol	39.44	31.34
GSMUA_Achr6P17300_001	Banana	cytosol	15.96	31.19
CDY67353	Canola	cytosol, plastid	37.09	30.98
CDX73547	Canola	cytosol, plastid	36.62	30.83
CDX93383	Canola	cytosol	38.5	30.83
Bra007008.1-P	Field mustard	cytosol, plastid	36.62	30.59
CDX91358	Canola	cytosol	38.5	30.26
Bra017191.1-P	Field mustard	cytosol	37.09	29.81
CDX74966	Canola	cytosol	38.03	29.78
Bra005201.1-P	Field mustard	cytosol	37.56	29.74
CDY68400	Canola	plastid	39.91	29.21
AT5G02600.1	Thale cress	plastid	41.78	27.9
CDY04859	Canola	cytosol	39.44	27.54
Bra028868.1-P	Field mustard	cytosol, plastid	35.21	25.95
CDY10437	Canola	cytosol, plastid	37.56	25.24
Bra009578.1-P	Field mustard	cytosol, plastid	37.56	24.32
Zm00001d038419_P001	Maize	cytosol	22.54	21.15

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0006810	GO:GO:0008150
GO:GO:0030001	GO:GO:0046872	EnsemblPlantsGene:GSMUA_Achr7G15330_001	EnsemblPlants:GSMUA_Achr7P15330_001	EnsemblPlants:GSMUA_Achr7T15330_001	InterPro:HMA_dom
InterPro:HMA_dom_sf	InterPro:IPR006121	UniProt:M0THS0	PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814
PANTHER:PTHR22814:SF130	SUPFAM:SSF55008	UniParc:UPI0002956A79	SEG:seg	:	:

Description

Putative heavy metal-associated domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G15330_001]

Coordinates

chr7:+:12259597..12260415

Molecular Weight (calculated)

23127.9 Da

IEP (calculated)

11.323

GRAVY (calculated)

-0.244

Length

213 amino acids

Sequence
(BLAST)

001: MAPLLFREIK AAGFSCASPS SAAVCSTIHQ RSIVQPVTGR AIDRHTPHLR DPQRTRSQFT SKPRSHNPKA GRKSSAKQAD LVNPADSSRC LLSSSRFRLD
101: DAAFYDIFPG PQPIPPPYRV KLSSSFPIAG RGAPDFVTLQ VVVLRVSLHC KGCEGKVRRH IAKMQGVSSF SVDLATKKVT VVGDVTPLGV LNSISKVKHA
201: QFWQSPPRAS ASF

Best Arabidopsis Sequence Match ( AT2G28660.1 )
(BLAST)

001: MRFSDIFCSS PASTAVRHST LHHDGNVTGG RRSFQSHLRS QNPSKKKDKT VPCFSSEMPL IPIPRHLSCR NSFESPSGFR PKIASARGSD VQIRRKSSAD
101: VSDLRRSRSS LLSSSSRYLL KDHKSLKGDD KDLWLSSDRS KDLILYRDRN VTSSASSSSS SSSSSFSSSV TNVSSPAPST DDQVVVLRVS IHCKGCEGKV
201: RKHISKMEGV TSYTIDLATK KVTVVGKITP VGLVESISKV KFAQLWPSSS SPPFPHIPNY SLLKS

Arabidopsis Description

At2g28660 [Source:UniProtKB/TrEMBL;Acc:Q7XZS3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.