Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028868.1-P | Field mustard | cytosol, plastid | 92.13 | 97.23 |
| CDY55409 | Canola | nucleus | 45.9 | 96.55 |
| CDY55410 | Canola | cytosol | 36.72 | 88.19 |
| CDY68400 | Canola | plastid | 80.0 | 83.85 |
| CDY10437 | Canola | cytosol, plastid | 82.95 | 79.81 |
| AT5G02600.1 | Thale cress | plastid | 82.95 | 79.31 |
| CDY00957 | Canola | cytosol, plastid | 11.48 | 46.05 |
| CDY08589 | Canola | cytosol, plastid | 11.48 | 46.05 |
| GSMUA_Achr2P16130_001 | Banana | mitochondrion, plastid | 31.15 | 44.39 |
| CDY04920 | Canola | cytosol, plastid | 11.15 | 44.16 |
| GSMUA_Achr4P30560_001 | Banana | plastid | 27.87 | 44.04 |
| GSMUA_Achr7P15330_001 | Banana | plastid | 27.54 | 39.44 |
| GSMUA_Achr7P10400_001 | Banana | plastid | 26.89 | 38.68 |
| GSMUA_Achr10P... | Banana | cytosol, plastid | 22.3 | 38.64 |
| Zm00001d034634_P001 | Maize | plastid | 26.56 | 38.57 |
| EER90630 | Sorghum | plastid | 26.89 | 38.5 |
| GSMUA_Achr6P34370_001 | Banana | plastid | 27.87 | 38.29 |
| GSMUA_Achr9P03120_001 | Banana | plastid | 27.87 | 38.29 |
| Os03t0819400-01 | Rice | plastid | 25.25 | 37.93 |
| Zm00001d012973_P001 | Maize | plastid | 25.9 | 37.44 |
| CDY52751 | Canola | cytosol | 30.49 | 37.2 |
| CDY07583 | Canola | cytosol | 29.18 | 36.63 |
| CDY67353 | Canola | cytosol, plastid | 30.16 | 36.08 |
| HORVU5Hr1G112560.1 | Barley | plastid | 23.93 | 35.27 |
| CDX73547 | Canola | cytosol, plastid | 29.18 | 35.18 |
| TraesCS5A01G475200.1 | Wheat | plastid | 23.93 | 34.93 |
| CDX93383 | Canola | cytosol | 30.16 | 34.59 |
| CDX91358 | Canola | cytosol | 30.49 | 34.32 |
| CDX74966 | Canola | cytosol | 30.49 | 34.19 |
| TraesCS5B01G488200.1 | Wheat | plastid | 23.61 | 34.12 |
| CDY18449 | Canola | cytosol | 29.84 | 33.96 |
| CDX94814 | Canola | cytosol | 15.08 | 32.86 |
| CDX77196 | Canola | plastid | 25.9 | 29.81 |
| CDX72154 | Canola | cytosol | 10.16 | 29.52 |
| CDY71670 | Canola | cytosol | 10.16 | 29.52 |
| CDY31723 | Canola | plastid | 25.57 | 29.43 |
| CDY14145 | Canola | cytosol, mitochondrion, peroxisome, plastid | 11.15 | 28.81 |
| CDY69094 | Canola | cytosol | 9.51 | 25.89 |
| CDX67640 | Canola | cytosol | 10.16 | 24.6 |
| Zm00001d038419_P001 | Maize | cytosol | 18.03 | 24.23 |
| CDX76052 | Canola | cytosol | 10.49 | 23.19 |
| CDY43346 | Canola | cytosol | 10.49 | 18.82 |
| CDY32007 | Canola | plastid | 10.49 | 17.3 |
Protein Annotations
| Gene3D:3.30.70.100 | MapMan:35.1 | GO:A0A078EW78 | EnsemblPlants:CDY04859 | ProteinID:CDY04859 | ProteinID:CDY04859.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 |
| EnsemblPlantsGene:GSBRNA2T00119576001 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 | PFAM:PF00403 | PFscan:PS50846 |
| PANTHER:PTHR22814 | PANTHER:PTHR22814:SF130 | SUPFAM:SSF55008 | UniParc:UPI0004EF42E8 | SEG:seg | : |
Description
BnaAnng00410D
Coordinates
chrLK031958:-:418912..420213
Molecular Weight (calculated)
33237.4 Da
IEP (calculated)
9.277
GRAVY (calculated)
-0.549
Length
305 amino acids
Sequence
(BLAST)
(BLAST)
001: MLCASQASRR DICSTMEPSS ATIRLGGRAI DRHNPIIRDG RRFTPPPSPN HNSSTSSASS STYHTPLKTR LGLESSEQPR VAKRKSKKGQ CNGGKTPIGC
101: PNSDTPQGSS RYLLSNPVFF DGFVDSDPIP LPIEPEITMC DELDKIHEDR LVINASKHLS SSSFLEKKQP DFFDGFLDYD PVMSPDNPFF ESTKASPTAS
201: QSSLEDKDVS SLDLKFSPPP PPPSPPPPEK SSSSDQVVIL RVSLHCKGCA GKVKKHLSKL KGVTSFKIDF AAKKVTVTGD VTPLTVLSTI SKVKNAQFWP
301: EIIKK
101: PNSDTPQGSS RYLLSNPVFF DGFVDSDPIP LPIEPEITMC DELDKIHEDR LVINASKHLS SSSFLEKKQP DFFDGFLDYD PVMSPDNPFF ESTKASPTAS
201: QSSLEDKDVS SLDLKFSPPP PPPSPPPPEK SSSSDQVVIL RVSLHCKGCA GKVKKHLSKL KGVTSFKIDF AAKKVTVTGD VTPLTVLSTI SKVKNAQFWP
301: EIIKK
001: MLCASQASTT TLCSTMDQTS QPSSSSSATI RLGGRAIDRH NPIIRDGRRL TPPPSPNLNP SSSSSSTYHT PLMTRLGLES SEQKRLAKRK SKKGDSDVGK
101: SPVSCFSSDT PQGSSRYLLS NPVFFDGFVD SDPIPIPIDE PEITKADDLN NFHEDRLIIN ASKYLSTSAS FLEKKQPDFF EGFLDYEPVL SPDNPFSEPT
201: KASPTASLSS LEDKDVSSPD FKFSPPPPPP PSPPQSSPPS PPEKNSSSDQ VVVLRVSLHC KGCAGKVKKH LSKLKGVTSY NIDFAAKKVT VTGDVTPLTV
301: LASISKVKNA QFWPEIIQK
101: SPVSCFSSDT PQGSSRYLLS NPVFFDGFVD SDPIPIPIDE PEITKADDLN NFHEDRLIIN ASKYLSTSAS FLEKKQPDFF EGFLDYEPVL SPDNPFSEPT
201: KASPTASLSS LEDKDVSSPD FKFSPPPPPP PSPPQSSPPS PPEKNSSSDQ VVVLRVSLHC KGCAGKVKKH LSKLKGVTSY NIDFAAKKVT VTGDVTPLTV
301: LASISKVKNA QFWPEIIQK
Arabidopsis Description
NAKR1Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LDS4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.