Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
- peroxisome 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04920 | Canola | cytosol, plastid | 65.25 | 100.0 |
| CDY00957 | Canola | cytosol, plastid | 55.93 | 86.84 |
| CDY08589 | Canola | cytosol, plastid | 55.08 | 85.53 |
| GSMUA_Achr6P07500_001 | Banana | cytosol, plastid | 54.24 | 57.14 |
| CDY71670 | Canola | cytosol | 50.85 | 57.14 |
| CDX72154 | Canola | cytosol | 50.85 | 57.14 |
| CDX67640 | Canola | cytosol | 51.69 | 48.41 |
| CDX76052 | Canola | cytosol | 50.85 | 43.48 |
| CDY32007 | Canola | plastid | 58.47 | 37.3 |
| CDY43346 | Canola | cytosol | 51.69 | 35.88 |
| CDY55410 | Canola | cytosol | 27.12 | 25.2 |
| CDX94814 | Canola | cytosol | 22.88 | 19.29 |
| CDY07583 | Canola | cytosol | 29.66 | 14.4 |
| CDY67353 | Canola | cytosol, plastid | 30.51 | 14.12 |
| CDY52751 | Canola | cytosol | 29.66 | 14.0 |
| CDX73547 | Canola | cytosol, plastid | 29.66 | 13.83 |
| CDY69094 | Canola | cytosol | 11.86 | 12.5 |
| CDX91358 | Canola | cytosol | 27.97 | 12.18 |
| CDX74966 | Canola | cytosol | 27.97 | 12.13 |
| CDX93383 | Canola | cytosol | 27.12 | 12.03 |
| CDY18449 | Canola | cytosol | 27.12 | 11.94 |
| CDY68400 | Canola | plastid | 28.81 | 11.68 |
| CDY31723 | Canola | plastid | 25.42 | 11.32 |
| CDX77196 | Canola | plastid | 25.42 | 11.32 |
| CDY04859 | Canola | cytosol | 28.81 | 11.15 |
| CDY10437 | Canola | cytosol, plastid | 27.12 | 10.09 |
| CDY55409 | Canola | nucleus | 1.69 | 1.38 |
Protein Annotations
| MapMan:25.5.2.3 | Gene3D:3.30.70.100 | GO:A0A078FI90 | UniProt:A0A078FI90 | EnsemblPlants:CDY14145 | ProteinID:CDY14145 |
| ProteinID:CDY14145.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0030001 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00078691001 | InterPro:HMA_dom |
| InterPro:HMA_dom_sf | InterPro:IPR006121 | PFAM:PF00403 | PFscan:PS50846 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF172 |
| SUPFAM:SSF55008 | TMHMM:TMhelix | UniParc:UPI0004EF444C | SEG:seg | : | : |
Description
BnaC02g02620DBnaC02g02620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FI90]
Coordinates
chrLK032040:+:611745..614333
Molecular Weight (calculated)
13168.1 Da
IEP (calculated)
10.773
GRAVY (calculated)
-0.446
Length
118 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEKGRRRRR RNRINSLSIS LSFILATVVL KRLHHQEERR DMSQTVVLKV AMPCEGCVGA VKRVLGKMQG VESFDVDLKE QKVTVKGNVE PEAVLQTVSK
101: TGKKTSFWGA DEAETAKA
101: TGKKTSFWGA DEAETAKA
001: MLKDLFQAVS YQNTASLSLF QALSVVESKA MSQTVVLRVA MTCEGCVGAV KRVLGKMEGV ESFDVDIKEQ KVTVKGNVQP DAVLQTVTKT GKKTAFWEAE
101: GETAKA
101: GETAKA
Arabidopsis Description
ATX1homolog of anti-oxidant 1 [Source:TAIR;Acc:AT1G66240]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.