Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY18449 | Canola | cytosol | 96.24 | 95.52 |
| Bra017191.1-P | Field mustard | cytosol | 94.74 | 95.09 |
| CDX91358 | Canola | cytosol | 79.7 | 78.23 |
| CDX74966 | Canola | cytosol | 79.32 | 77.57 |
| AT2G37390.1 | Thale cress | cytosol | 72.93 | 74.9 |
| CDY52751 | Canola | cytosol | 51.5 | 54.8 |
| CDY07583 | Canola | cytosol | 49.62 | 54.32 |
| CDY67353 | Canola | cytosol, plastid | 51.88 | 54.12 |
| CDX73547 | Canola | cytosol, plastid | 49.62 | 52.17 |
| GSMUA_Achr4P30560_001 | Banana | plastid | 33.83 | 46.63 |
| GSMUA_Achr9P03120_001 | Banana | plastid | 36.09 | 43.24 |
| GSMUA_Achr6P34370_001 | Banana | plastid | 35.34 | 42.34 |
| CDY04920 | Canola | cytosol, plastid | 12.03 | 41.56 |
| CDY55410 | Canola | cytosol | 19.55 | 40.94 |
| GSMUA_Achr2P16130_001 | Banana | mitochondrion, plastid | 32.71 | 40.65 |
| GSMUA_Achr10P... | Banana | cytosol, plastid | 26.69 | 40.34 |
| VIT_08s0040g02700.t01 | Wine grape | cytosol, plastid | 40.6 | 40.0 |
| CDY08589 | Canola | cytosol, plastid | 11.28 | 39.47 |
| CDY00957 | Canola | cytosol, plastid | 11.28 | 39.47 |
| Os03t0819400-01 | Rice | plastid | 29.7 | 38.92 |
| Zm00001d012973_P001 | Maize | plastid | 30.83 | 38.86 |
| KRH67578 | Soybean | plastid | 42.11 | 38.62 |
| KRG95861 | Soybean | plastid | 42.11 | 38.62 |
| Zm00001d034634_P001 | Maize | plastid | 30.45 | 38.57 |
| EER90630 | Sorghum | plastid | 30.83 | 38.5 |
| GSMUA_Achr7P15330_001 | Banana | plastid | 30.83 | 38.5 |
| GSMUA_Achr7P10400_001 | Banana | plastid | 30.45 | 38.21 |
| KRH19750 | Soybean | plastid | 39.47 | 38.04 |
| KRH32346 | Soybean | plastid | 39.47 | 37.5 |
| HORVU5Hr1G112560.1 | Barley | plastid | 28.95 | 37.2 |
| TraesCS5B01G488200.1 | Wheat | plastid | 29.32 | 36.97 |
| TraesCS5A01G475200.1 | Wheat | plastid | 28.95 | 36.84 |
| PGSC0003DMT400045359 | Potato | cytosol | 41.35 | 36.67 |
| Solyc10g085910.1.1 | Tomato | nucleus | 40.6 | 36.36 |
| CDY68400 | Canola | plastid | 36.47 | 33.33 |
| CDX94814 | Canola | cytosol | 16.54 | 31.43 |
| CDY04859 | Canola | cytosol | 34.59 | 30.16 |
| CDY71670 | Canola | cytosol | 11.28 | 28.57 |
| CDX72154 | Canola | cytosol | 11.28 | 28.57 |
| CDX77196 | Canola | plastid | 28.2 | 28.3 |
| CDY31723 | Canola | plastid | 27.82 | 27.92 |
| CDY10437 | Canola | cytosol, plastid | 32.33 | 27.13 |
| CDY14145 | Canola | cytosol, mitochondrion, peroxisome, plastid | 12.03 | 27.12 |
| CDY55409 | Canola | nucleus | 13.91 | 25.52 |
| CDY69094 | Canola | cytosol | 10.15 | 24.11 |
| CDX67640 | Canola | cytosol | 11.28 | 23.81 |
| Zm00001d038419_P001 | Maize | cytosol | 20.3 | 23.79 |
| CDX76052 | Canola | cytosol | 11.28 | 21.74 |
| CDY43346 | Canola | cytosol | 11.28 | 17.65 |
| CDY32007 | Canola | plastid | 11.65 | 16.76 |
Protein Annotations
| EnsemblPlants:CDX93383 | EnsemblPlantsGene:GSBRNA2T00155369001 | Gene3D:3.30.70.100 | GO:A0A078E1C4 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf |
| InterPro:IPR006121 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF82 | PFAM:PF00403 | PFscan:PS50846 | ProteinID:CDX93383 |
| ProteinID:CDX93383.1 | SEG:seg | SUPFAM:SSF55008 | UniParc:UPI0004EEE059 | MapMan:35.1 | : |
Description
BnaC04g45130D
Coordinates
chrLK031875:-:1456261..1457433
Molecular Weight (calculated)
28215.7 Da
IEP (calculated)
9.871
GRAVY (calculated)
-0.350
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGRMFCASQ ASTAICSSMD HIPKPTTTTV VVDDEKLSDR AIDRHNPIIK DGRRSSVDDY IRMPASPADG EISNKTIEIY KGRRSVTARK STGGGGSGGG
101: AAALFKLITN DLSLARKSFS CVARPSSDFV KTPAGSTRYL LGSDPGSLTG SAGQDTVAPK SPAVEEIKQS MEEKTSGGGS DQQVVVLKVS LHCRGCEAKV
201: RKHLSRMQGV TSFNIDFAAK KVTVTGDITP LGILDSISKV KNAQFWTAPT LPTPTLTMPN LETPNP
101: AAALFKLITN DLSLARKSFS CVARPSSDFV KTPAGSTRYL LGSDPGSLTG SAGQDTVAPK SPAVEEIKQS MEEKTSGGGS DQQVVVLKVS LHCRGCEAKV
201: RKHLSRMQGV TSFNIDFAAK KVTVTGDITP LGILDSISKV KNAQFWTAPT LPTPTLTMPN LETPNP
001: MKGRMFCASQ ASTAICSSMD HVHKSTTTDE DERNSGRAID RHNPIIKDGR RSFADDFIKL PTSAEDGEMS NKKLEIYKGR RSITGRRSTG GGGGGGAAAL
101: LKLITNDIGL ARKSFSCVAR PACDLIKTPV GSTRYLLGSD PDSITGSVDQ DPAKTVEAEA PAGEDKTLTE KKTTCGDTDQ QVVVLKVSLH CRGCEGKVRK
201: HLARMQGVTS FNIDFAAKKV TVTGDITPLE ILDSISKVKN AQFWTNPTIP KPNVETQNP
101: LKLITNDIGL ARKSFSCVAR PACDLIKTPV GSTRYLLGSD PDSITGSVDQ DPAKTVEAEA PAGEDKTLTE KKTTCGDTDQ QVVVLKVSLH CRGCEGKVRK
201: HLARMQGVTS FNIDFAAKKV TVTGDITPLE ILDSISKVKN AQFWTNPTIP KPNVETQNP
Arabidopsis Description
NAKR2Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q58FZ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.