Factsheet for GSMUA_Achr10P26770_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

plastid 4
cytosol 2
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P16130_001	Banana	mitochondrion, plastid	48.86	40.19
GSMUA_Achr4P30560_001	Banana	plastid	43.75	39.9
GSMUA_Achr10P...	Banana	cytosol	7.95	38.89
GSMUA_Achr7P17730_001	Banana	cytosol, endoplasmic reticulum, plastid	27.84	36.84
GSMUA_Achr1P14500_001	Banana	cytosol	27.27	35.56
GSMUA_Achr5P04340_001	Banana	cytosol	31.25	35.26
GSMUA_Achr6P34370_001	Banana	plastid	44.32	35.14
GSMUA_Achr9P03120_001	Banana	plastid	44.32	35.14
GSMUA_Achr7P10400_001	Banana	plastid	41.48	34.43
GSMUA_Achr10P...	Banana	cytosol	31.82	34.36
Os03t0819400-01	Rice	plastid	38.07	33.0
EER90630	Sorghum	plastid	39.2	32.39
GSMUA_Achr7P15330_001	Banana	plastid	39.2	32.39
Zm00001d034634_P001	Maize	plastid	38.64	32.38
PGSC0003DMT400040203	Potato	cytosol	47.73	32.31
Solyc11g073020.1.1	Tomato	cytosol	47.16	32.17
HORVU5Hr1G112560.1	Barley	plastid	36.93	31.4
Zm00001d012973_P001	Maize	plastid	37.5	31.28
GSMUA_Achr6P07500_001	Banana	cytosol, plastid	19.89	31.25
TraesCS5B01G488200.1	Wheat	plastid	36.93	30.81
TraesCS5A01G475200.1	Wheat	plastid	36.36	30.62
GSMUA_Achr6P17300_001	Banana	cytosol	18.75	30.28
GSMUA_Achr8P26110_001	Banana	cytosol	26.7	29.94
VIT_08s0040g02700.t01	Wine grape	cytosol, plastid	44.32	28.89
KRH19750	Soybean	plastid	44.89	28.62
KRH32346	Soybean	plastid	45.45	28.57
AT3G53530.2	Thale cress	cytosol, plastid	39.77	28.23
Bra003142.1-P	Field mustard	cytosol, plastid	39.77	28.11
CDX73547	Canola	cytosol, plastid	39.77	27.67
CDY52751	Canola	cytosol	39.2	27.6
CDY07583	Canola	cytosol	38.07	27.57
CDY67353	Canola	cytosol, plastid	39.77	27.45
Bra007008.1-P	Field mustard	cytosol, plastid	39.2	27.06
KRG95861	Soybean	plastid	44.32	26.9
CDX93383	Canola	cytosol	40.34	26.69
KRH67578	Soybean	plastid	43.75	26.55
Bra017191.1-P	Field mustard	cytosol	39.77	26.42
AT2G37390.1	Thale cress	cytosol	38.64	26.25
CDX91358	Canola	cytosol	40.34	26.2
Bra005201.1-P	Field mustard	cytosol	39.77	26.02
CDY18449	Canola	cytosol	39.2	25.75
CDX74966	Canola	cytosol	39.77	25.74
AT5G02600.1	Thale cress	plastid	40.91	22.57
CDY68400	Canola	plastid	36.93	22.34
CDY04859	Canola	cytosol	38.64	22.3
Bra028868.1-P	Field mustard	cytosol, plastid	35.8	21.8
CDY10437	Canola	cytosol, plastid	36.36	20.19
Bra009578.1-P	Field mustard	cytosol, plastid	35.8	19.15
Zm00001d038419_P001	Maize	cytosol	23.3	18.06

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.2	GO:GO:0003674	GO:GO:0005488	GO:GO:0006810	GO:GO:0008150
GO:GO:0030001	GO:GO:0046872	EnsemblPlantsGene:GSMUA_Achr10G26770_001	EnsemblPlants:GSMUA_Achr10P26770_001	EnsemblPlants:GSMUA_Achr10T26770_001	InterPro:HMA_dom
InterPro:HMA_dom_sf	InterPro:IPR006121	UniProt:M0RLQ1	PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814
PANTHER:PTHR22814:SF82	SUPFAM:SSF55008	UniParc:UPI0002968D49	SEG:seg	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G26770_001]

Coordinates

chr10:+:30172715..30173393

Molecular Weight (calculated)

18999.7 Da

IEP (calculated)

10.453

GRAVY (calculated)

-0.451

Length

176 amino acids

Sequence
(BLAST)

001: MAPLFSCASP ATHLRTLLRN PRRGKLALTR TKSRIQKSRK SLRKHTDNDD DAFPGEETAP LLSADRSSPE VTKKDEPAVF GLPSSTASKE QVVHLRVALH
101: CKGCEGKVRK HISKMEGETG VTSFDIDFEA KKVTVVGAVT ASGVLNSISK VKNAQLWPSS PPFLPSSSSS SCFHGT

Best Arabidopsis Sequence Match ( AT5G02600.1 )
(BLAST)

001: MLCASQASTT TLCSTMDQTS QPSSSSSATI RLGGRAIDRH NPIIRDGRRL TPPPSPNLNP SSSSSSTYHT PLMTRLGLES SEQKRLAKRK SKKGDSDVGK
101: SPVSCFSSDT PQGSSRYLLS NPVFFDGFVD SDPIPIPIDE PEITKADDLN NFHEDRLIIN ASKYLSTSAS FLEKKQPDFF EGFLDYEPVL SPDNPFSEPT
201: KASPTASLSS LEDKDVSSPD FKFSPPPPPP PSPPQSSPPS PPEKNSSSDQ VVVLRVSLHC KGCAGKVKKH LSKLKGVTSY NIDFAAKKVT VTGDVTPLTV
301: LASISKVKNA QFWPEIIQK

Arabidopsis Description

NAKR1Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LDS4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.