Factsheet for Bra003142.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

nucleus 2
cytosol 2
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY52751	Canola	cytosol	98.39	98.0
CDY07583	Canola	cytosol	91.16	93.42
Bra007008.1-P	Field mustard	cytosol, plastid	83.13	81.18
AT3G53530.2	Thale cress	cytosol, plastid	75.5	75.81
Bra017191.1-P	Field mustard	cytosol	55.42	52.08
Bra005201.1-P	Field mustard	cytosol	55.82	51.67
Bra029854.1-P	Field mustard	cytosol, plastid	14.46	47.37
GSMUA_Achr4P30560_001	Banana	plastid	32.13	41.45
GSMUA_Achr9P03120_001	Banana	plastid	36.14	40.54
GSMUA_Achr10P...	Banana	cytosol, plastid	28.11	39.77
GSMUA_Achr2P16130_001	Banana	mitochondrion, plastid	33.73	39.25
GSMUA_Achr7P15330_001	Banana	plastid	32.93	38.5
GSMUA_Achr6P34370_001	Banana	plastid	33.73	37.84
KRH19750	Soybean	plastid	41.37	37.32
VIT_08s0040g02700.t01	Wine grape	cytosol, plastid	40.16	37.04
Zm00001d012973_P001	Maize	plastid	30.92	36.49
Os03t0819400-01	Rice	plastid	29.72	36.45
Zm00001d034634_P001	Maize	plastid	30.52	36.19
KRH32346	Soybean	plastid	40.56	36.07
TraesCS5A01G475200.1	Wheat	plastid	30.12	35.89
GSMUA_Achr7P10400_001	Banana	plastid	30.52	35.85
HORVU5Hr1G112560.1	Barley	plastid	29.72	35.75
EER90630	Sorghum	plastid	30.12	35.21
KRH67578	Soybean	plastid	40.96	35.17
KRG95861	Soybean	plastid	40.96	35.17
TraesCS5B01G488200.1	Wheat	plastid	29.72	35.07
Solyc10g085910.1.1	Tomato	nucleus	40.56	34.01
PGSC0003DMT400045359	Potato	cytosol	40.96	34.0
Bra007230.1-P	Field mustard	cytosol, plastid	12.85	30.19
Bra035681.1-P	Field mustard	plastid	31.73	29.81
Bra028868.1-P	Field mustard	cytosol, plastid	33.73	29.07
Bra001948.1-P	Field mustard	cytosol	15.26	27.14
Bra009578.1-P	Field mustard	cytosol, plastid	34.94	26.44
Bra003234.1-P	Field mustard	cytosol, plastid	12.45	24.41
Zm00001d038419_P001	Maize	cytosol	18.47	20.26
Bra014702.1-P	Field mustard	cytosol	12.45	18.79

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.1	EnsemblPlantsGene:Bra003142	EnsemblPlants:Bra003142.1	EnsemblPlants:Bra003142.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0006810	GO:GO:0008150	GO:GO:0030001	GO:GO:0046872
InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121	UniProt:M4CG10	InterPro:NAKR2/3	PFAM:PF00403
PIRSF:PIRSF011221	PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF82	SUPFAM:SSF55008	UniParc:UPI00025413B6
SEG:seg	:	:	:	:	:

Description

AT3G53530 (E=2e-094) | heavy-metal-associated domain-containing protein

Coordinates

chrA07:+:11554911..11556093

Molecular Weight (calculated)

26339.2 Da

IEP (calculated)

9.734

GRAVY (calculated)

-0.448

Length

249 amino acids

Sequence
(BLAST)

001: MFCASQASTA TASHDERSVA ARAIDRHNPI IKDGRRSFTA PCSSGDDYIA PYRQLSKVTR IPSTSGEGKM IQGVEKGRKS TSGSLLKLSD NISLARKSFG
101: CVAGPACDVT ESTPPGSTRY LLGSEPVSSG KDTVVTEEGE PSLAKRGTGA ADEDKKKTSS GSDQASKVVV LRVSLHCHCR GCQGKVKKHL SRMQGVTSFS
201: IDFASKKVTV TGDVTPLEVL GCLSKVKNAQ FWTPPPPPPS SLPRATLEN

Best Arabidopsis Sequence Match ( AT3G53530.1 )
(BLAST)

001: MKAGMFYCAS QASTATANGE RTVTARAIDR HNPIIKDGRR SFTAPCSSGD DYVAPYRQLS KITRVPSSSG DGKSVQVDKG RRSNSGSLMK LISYDVSLAR
101: KSFGCVVATP KTPPGSTRYL LGSDPVSLAG STGQDTVATE ESEASAPKRG SSGPVEEKKK SSGSGSDQVV VLRVSLHCHC RGCQGKVKKH LSKMQGVTSF
201: NIDFASKKVT VTGDITPLEV LGCLSKVKNA QFWTPPPPSI PRANPET

Arabidopsis Description

NAKR3Chloroplast-targeted copper chaperone protein [Source:TAIR;Acc:AT3G53530]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.