Factsheet for Bra007008.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 2
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67353	Canola	cytosol, plastid	98.82	98.82
Bra003142.1-P	Field mustard	cytosol, plastid	81.18	83.13
Bra017191.1-P	Field mustard	cytosol	53.73	51.7
Bra005201.1-P	Field mustard	cytosol	53.73	50.93
Bra029854.1-P	Field mustard	cytosol, plastid	14.51	48.68
GSMUA_Achr4P30560_001	Banana	plastid	32.94	43.52
GSMUA_Achr9P03120_001	Banana	plastid	35.29	40.54
GSMUA_Achr6P34370_001	Banana	plastid	34.9	40.09
GSMUA_Achr2P16130_001	Banana	mitochondrion, plastid	32.94	39.25
GSMUA_Achr10P...	Banana	cytosol, plastid	27.06	39.2
VIT_08s0040g02700.t01	Wine grape	cytosol, plastid	39.61	37.41
KRH19750	Soybean	plastid	40.39	37.32
GSMUA_Achr7P10400_001	Banana	plastid	30.98	37.26
Zm00001d012973_P001	Maize	plastid	30.59	36.97
GSMUA_Achr7P15330_001	Banana	plastid	30.59	36.62
Os03t0819400-01	Rice	plastid	29.02	36.45
KRH32346	Soybean	plastid	39.61	36.07
KRG95861	Soybean	plastid	40.78	35.86
Zm00001d034634_P001	Maize	plastid	29.41	35.71
EER90630	Sorghum	plastid	29.8	35.68
KRH67578	Soybean	plastid	40.39	35.52
TraesCS5A01G475200.1	Wheat	plastid	29.02	35.41
HORVU5Hr1G112560.1	Barley	plastid	28.63	35.27
TraesCS5B01G488200.1	Wheat	plastid	29.02	35.07
Solyc10g085910.1.1	Tomato	nucleus	40.39	34.68
PGSC0003DMT400045359	Potato	cytosol	40.78	34.67
Bra007230.1-P	Field mustard	cytosol, plastid	12.55	30.19
Bra035681.1-P	Field mustard	plastid	29.8	28.68
Bra001948.1-P	Field mustard	cytosol	15.69	28.57
Bra028868.1-P	Field mustard	cytosol, plastid	32.16	28.37
Bra009578.1-P	Field mustard	cytosol, plastid	34.12	26.44
Bra003234.1-P	Field mustard	cytosol, plastid	12.55	25.2
Zm00001d038419_P001	Maize	cytosol	18.82	21.15
Bra014702.1-P	Field mustard	cytosol	12.55	19.39

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.1	EnsemblPlantsGene:Bra007008	EnsemblPlants:Bra007008.1	EnsemblPlants:Bra007008.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0006810	GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom
InterPro:HMA_dom_sf	InterPro:IPR006121	UniProt:M4CS16	InterPro:NAKR2/3	PFAM:PF00403	PIRSF:PIRSF011221
PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF82	SUPFAM:SSF55008	UniParc:UPI0002542F32	SEG:seg

Description

AT3G53530 (E=6e-093) | heavy-metal-associated domain-containing protein

Coordinates

chrA09:+:26791300..26792341

Molecular Weight (calculated)

26997.1 Da

IEP (calculated)

10.156

GRAVY (calculated)

-0.432

Length

255 amino acids

Sequence
(BLAST)

001: MKGTMFCASQ ASTATANHNE RSVMARAIDR HNPIIKDGRR SFTAPCSSGD DYIAPYRQLS KITRIPSSPS PSGDGKMIQV DKGRKSTSGS LLKLLSSDNI
101: SLARKSIGCF DVTKSTPPGS TRYLLGTDPA SLSGSTGKDM VVSEEGEPSE ARRGSGAAVE EKKTASSGSD QQASKVVVLR VSLHCQCRGC VGKVKTHLSR
201: MQGVTSFNID FASKKVTVTG DITPLQVLGC LSKVKNAQFW TPPPPSSLSS ANPEN

Best Arabidopsis Sequence Match ( AT3G53530.1 )
(BLAST)

001: MKAGMFYCAS QASTATANGE RTVTARAIDR HNPIIKDGRR SFTAPCSSGD DYVAPYRQLS KITRVPSSSG DGKSVQVDKG RRSNSGSLMK LISYDVSLAR
101: KSFGCVVATP KTPPGSTRYL LGSDPVSLAG STGQDTVATE ESEASAPKRG SSGPVEEKKK SSGSGSDQVV VLRVSLHCHC RGCQGKVKKH LSKMQGVTSF
201: NIDFASKKVT VTGDITPLEV LGCLSKVKNA QFWTPPPPSI PRANPET

Arabidopsis Description

NAKR3Chloroplast-targeted copper chaperone protein [Source:TAIR;Acc:AT3G53530]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.