Factsheet for GSMUA_Achr4P30560_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P16130_001	Banana	mitochondrion, plastid	74.61	67.29
GSMUA_Achr7P10400_001	Banana	plastid	64.25	58.49
GSMUA_Achr6P34370_001	Banana	plastid	63.73	55.41
GSMUA_Achr9P03120_001	Banana	plastid	60.62	52.7
GSMUA_Achr7P15330_001	Banana	plastid	49.74	45.07
GSMUA_Achr10P...	Banana	cytosol, plastid	39.9	43.75
Zm00001d034634_P001	Maize	plastid	44.04	40.48
GSMUA_Achr1P14500_001	Banana	cytosol	27.98	40.0
Os03t0819400-01	Rice	plastid	41.97	39.9
GSMUA_Achr10P...	Banana	cytosol	33.68	39.88
EER90630	Sorghum	plastid	43.52	39.44
Zm00001d012973_P001	Maize	plastid	43.01	39.34
GSMUA_Achr5P04340_001	Banana	cytosol	31.61	39.1
Solyc11g073020.1.1	Tomato	cytosol	50.78	37.98
VIT_08s0040g02700.t01	Wine grape	cytosol, plastid	52.85	37.78
PGSC0003DMT400040203	Potato	cytosol	50.78	37.69
HORVU5Hr1G112560.1	Barley	plastid	40.41	37.68
TraesCS5B01G488200.1	Wheat	plastid	40.93	37.44
TraesCS5A01G475200.1	Wheat	plastid	40.41	37.32
GSMUA_Achr7P17730_001	Banana	cytosol, endoplasmic reticulum, plastid	24.87	36.09
KRG95861	Soybean	plastid	53.37	35.52
KRH67578	Soybean	plastid	51.81	34.48
AT2G37390.1	Thale cress	cytosol	45.6	33.98
CDX93383	Canola	cytosol	46.63	33.83
KRH19750	Soybean	plastid	48.19	33.7
Bra017191.1-P	Field mustard	cytosol	46.11	33.58
AT3G53530.2	Thale cress	cytosol, plastid	43.01	33.47
CDY67353	Canola	cytosol, plastid	44.04	33.33
CDX91358	Canola	cytosol	46.63	33.21
CDY18449	Canola	cytosol	46.11	33.21
CDX73547	Canola	cytosol, plastid	43.52	33.2
GSMUA_Achr8P26110_001	Banana	cytosol	26.94	33.12
Bra007008.1-P	Field mustard	cytosol, plastid	43.52	32.94
KRH32346	Soybean	plastid	47.15	32.5
CDX74966	Canola	cytosol	45.6	32.35
Bra005201.1-P	Field mustard	cytosol	45.08	32.34
GSMUA_Achr6P07500_001	Banana	cytosol, plastid	18.65	32.14
Bra003142.1-P	Field mustard	cytosol, plastid	41.45	32.13
CDY52751	Canola	cytosol	40.93	31.6
CDY07583	Canola	cytosol	39.38	31.28
CDY68400	Canola	plastid	43.52	28.87
AT5G02600.1	Thale cress	plastid	46.63	28.21
CDY04859	Canola	cytosol	44.04	27.87
GSMUA_Achr10P...	Banana	cytosol	5.18	27.78
Bra028868.1-P	Field mustard	cytosol, plastid	39.9	26.64
GSMUA_Achr6P17300_001	Banana	cytosol	15.03	26.61
CDY10437	Canola	cytosol, plastid	42.49	25.87
Bra009578.1-P	Field mustard	cytosol, plastid	42.49	24.92
Zm00001d038419_P001	Maize	cytosol	25.91	22.03

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0006810	GO:GO:0008150
GO:GO:0030001	GO:GO:0046872	EnsemblPlantsGene:GSMUA_Achr4G30560_001	EnsemblPlants:GSMUA_Achr4P30560_001	EnsemblPlants:GSMUA_Achr4T30560_001	InterPro:HMA_dom
InterPro:HMA_dom_sf	InterPro:IPR006121	UniProt:M0STG8	PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814
PANTHER:PTHR22814:SF82	SUPFAM:SSF55008	UniParc:UPI000295186F	SEG:seg	:	:

Description

Putative heavy metal-associated domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G30560_001]

Coordinates

chr4:+:28089540..28090269

Molecular Weight (calculated)

21011.3 Da

IEP (calculated)

10.783

GRAVY (calculated)

-0.344

Length

193 amino acids

Sequence
(BLAST)

001: MKGVNFSCVS PASAAICTSI DRRSMVRGST GRAADRHTTH PRDPRRANSA LGSMSGATRE RRSRNQRSRK ILDKPSDLVT PPGSSRYLLN DDDFFDVFPS
101: VVTAAPLLSV DQPAVLKPPS STTSQEQVVH LRVSLHCKAC EMKVRKHISK MEGVTSFNID LATKKVTVIG DVTPLGVLDS VSKVKNAQLW PSL

Best Arabidopsis Sequence Match ( AT2G37390.2 )
(BLAST)

001: MKGRMFCASQ ASTAICSSMD HVHKSTTTDE DERNSGRAID RHNPIIKDGR RSFADDFIKL PTSAEDGEMS NKKLEIYKGR RSITGRRSTG GGGGGGAAAL
101: LKLITNDIGL ARKSFSCVAR PACDLIKTPV GSTRYLLGSD PDSITGSVDQ DPAKTVEAEA PAGEDKTLTE KKTTCGDTDQ VVVLKVSLHC RGCEGKVRKH
201: LARMQGVTSF NIDFAAKKVT VTGDITPLEI LDSISKVKNA QFWTNPTIPK PNVETQNP

Arabidopsis Description

NAKR2Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q58FZ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.