Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017191.1-P | Field mustard | cytosol | 96.27 | 97.36 |
| CDX93383 | Canola | cytosol | 95.52 | 96.24 |
| CDX91358 | Canola | cytosol | 80.22 | 79.34 |
| CDX74966 | Canola | cytosol | 79.85 | 78.68 |
| AT2G37390.1 | Thale cress | cytosol | 72.76 | 75.29 |
| CDY52751 | Canola | cytosol | 52.24 | 56.0 |
| CDY07583 | Canola | cytosol | 50.37 | 55.56 |
| CDY67353 | Canola | cytosol, plastid | 51.12 | 53.73 |
| CDX73547 | Canola | cytosol, plastid | 50.37 | 53.36 |
| GSMUA_Achr4P30560_001 | Banana | plastid | 33.21 | 46.11 |
| GSMUA_Achr9P03120_001 | Banana | plastid | 35.82 | 43.24 |
| CDY04920 | Canola | cytosol, plastid | 11.94 | 41.56 |
| GSMUA_Achr6P34370_001 | Banana | plastid | 34.33 | 41.44 |
| GSMUA_Achr2P16130_001 | Banana | mitochondrion, plastid | 32.09 | 40.19 |
| CDY55410 | Canola | cytosol | 19.03 | 40.16 |
| VIT_08s0040g02700.t01 | Wine grape | cytosol, plastid | 39.93 | 39.63 |
| CDY00957 | Canola | cytosol, plastid | 11.19 | 39.47 |
| CDY08589 | Canola | cytosol, plastid | 11.19 | 39.47 |
| GSMUA_Achr7P15330_001 | Banana | plastid | 31.34 | 39.44 |
| GSMUA_Achr10P... | Banana | cytosol, plastid | 25.75 | 39.2 |
| Os03t0819400-01 | Rice | plastid | 29.48 | 38.92 |
| Zm00001d012973_P001 | Maize | plastid | 30.6 | 38.86 |
| Zm00001d034634_P001 | Maize | plastid | 30.22 | 38.57 |
| EER90630 | Sorghum | plastid | 30.6 | 38.5 |
| KRH67578 | Soybean | plastid | 41.42 | 38.28 |
| KRG95861 | Soybean | plastid | 41.42 | 38.28 |
| GSMUA_Achr7P10400_001 | Banana | plastid | 30.22 | 38.21 |
| KRH19750 | Soybean | plastid | 38.81 | 37.68 |
| HORVU5Hr1G112560.1 | Barley | plastid | 28.73 | 37.2 |
| KRH32346 | Soybean | plastid | 38.81 | 37.14 |
| PGSC0003DMT400045359 | Potato | cytosol | 41.42 | 37.0 |
| TraesCS5B01G488200.1 | Wheat | plastid | 29.1 | 36.97 |
| TraesCS5A01G475200.1 | Wheat | plastid | 28.73 | 36.84 |
| Solyc10g085910.1.1 | Tomato | nucleus | 40.67 | 36.7 |
| CDY68400 | Canola | plastid | 35.82 | 32.99 |
| CDX94814 | Canola | cytosol | 16.79 | 32.14 |
| CDY04859 | Canola | cytosol | 33.96 | 29.84 |
| CDY71670 | Canola | cytosol | 11.57 | 29.52 |
| CDX72154 | Canola | cytosol | 11.57 | 29.52 |
| CDX77196 | Canola | plastid | 27.99 | 28.3 |
| CDY31723 | Canola | plastid | 27.61 | 27.92 |
| CDY14145 | Canola | cytosol, mitochondrion, peroxisome, plastid | 11.94 | 27.12 |
| CDY10437 | Canola | cytosol, plastid | 31.72 | 26.81 |
| CDY55409 | Canola | nucleus | 13.81 | 25.52 |
| CDX67640 | Canola | cytosol | 11.57 | 24.6 |
| CDY69094 | Canola | cytosol | 10.07 | 24.11 |
| Zm00001d038419_P001 | Maize | cytosol | 20.15 | 23.79 |
| CDX76052 | Canola | cytosol | 11.57 | 22.46 |
| CDY43346 | Canola | cytosol | 11.19 | 17.65 |
| CDY32007 | Canola | plastid | 11.94 | 17.3 |
Protein Annotations
| Gene3D:3.30.70.100 | MapMan:35.1 | GO:A0A078FZ23 | UniProt:A0A078FZ23 | EnsemblPlants:CDY18449 | ProteinID:CDY18449 |
| ProteinID:CDY18449.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0030001 |
| GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00005447001 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 | PFAM:PF00403 |
| PFscan:PS50846 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF82 | SUPFAM:SSF55008 | UniParc:UPI0004EEDD22 | SEG:seg |
Description
BnaA04g21380DBnaA04g21380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FZ23]
Coordinates
chrLK032085:-:542111..543321
Molecular Weight (calculated)
28364.9 Da
IEP (calculated)
9.871
GRAVY (calculated)
-0.318
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGRMFCASQ ASTAICSSMD HIPKPTTTTF VVDDEKLSDR AIDRHNPIIK DGRRSSVDDY IRIPASPADG EISNKTLEIY KGRRSVTARK STGGGGSGGG
101: AAALLKLITN DLSFARKSFS CVARPSSDFV KTPAGSTRYL LGSEPVSLTG SAGQDTVAPK SPAVEEIKPS MEEKTSGGGG GADQQVVVLK VSLHCRGCEA
201: KVRKHLSRMQ GVTSFNIDFA AKKVTVTGDI TPLGILDSIS KVKNAQFWTA PTLPTPTLPM PNLETPNP
101: AAALLKLITN DLSFARKSFS CVARPSSDFV KTPAGSTRYL LGSEPVSLTG SAGQDTVAPK SPAVEEIKPS MEEKTSGGGG GADQQVVVLK VSLHCRGCEA
201: KVRKHLSRMQ GVTSFNIDFA AKKVTVTGDI TPLGILDSIS KVKNAQFWTA PTLPTPTLPM PNLETPNP
001: MKGRMFCASQ ASTAICSSMD HVHKSTTTDE DERNSGRAID RHNPIIKDGR RSFADDFIKL PTSAEDGEMS NKKLEIYKGR RSITGRRSTG GGGGGGAAAL
101: LKLITNDIGL ARKSFSCVAR PACDLIKTPV GSTRYLLGSD PDSITGSVDQ DPAKTVEAEA PAGEDKTLTE KKTTCGDTDQ QVVVLKVSLH CRGCEGKVRK
201: HLARMQGVTS FNIDFAAKKV TVTGDITPLE ILDSISKVKN AQFWTNPTIP KPNVETQNP
101: LKLITNDIGL ARKSFSCVAR PACDLIKTPV GSTRYLLGSD PDSITGSVDQ DPAKTVEAEA PAGEDKTLTE KKTTCGDTDQ QVVVLKVSLH CRGCEGKVRK
201: HLARMQGVTS FNIDFAAKKV TVTGDITPLE ILDSISKVKN AQFWTNPTIP KPNVETQNP
Arabidopsis Description
NAKR2Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q58FZ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.