CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG95861	Soybean	plastid	91.72	91.72
KRH19750	Soybean	plastid	65.52	68.84
KRH32346	Soybean	plastid	64.48	66.79
VIT_08s0040g02700.t01	Wine grape	cytosol, plastid	53.45	57.41
GSMUA_Achr4P30560_001	Banana	plastid	34.48	51.81
GSMUA_Achr2P16130_001	Banana	mitochondrion, plastid	36.55	49.53
GSMUA_Achr9P03120_001	Banana	plastid	34.83	45.5
GSMUA_Achr7P10400_001	Banana	plastid	33.1	45.28
Solyc10g085910.1.1	Tomato	nucleus	45.52	44.44
PGSC0003DMT400045359	Potato	cytosol	45.86	44.33
KRH10325	Soybean	plastid	28.28	44.32
GSMUA_Achr6P34370_001	Banana	plastid	33.79	44.14
GSMUA_Achr7P15330_001	Banana	plastid	32.41	44.13
GSMUA_Achr10P...	Banana	cytosol, plastid	26.55	43.75
Os03t0819400-01	Rice	plastid	30.0	42.86
AT2G37390.1	Thale cress	cytosol	38.28	42.86
Bra017191.1-P	Field mustard	cytosol	38.97	42.64
CDX93383	Canola	cytosol	38.62	42.11
KRH25010	Soybean	plastid	34.83	42.08
CDX91358	Canola	cytosol	39.31	42.07
Zm00001d034634_P001	Maize	plastid	30.34	41.9
HORVU5Hr1G112560.1	Barley	plastid	29.66	41.55
CDY18449	Canola	cytosol	38.28	41.42
KRH22990	Soybean	cytosol	18.97	41.35
Bra005201.1-P	Field mustard	cytosol	38.28	41.26
KRH29875	Soybean	plastid	34.14	41.25
Zm00001d012973_P001	Maize	plastid	30.0	41.23
CDY67353	Canola	cytosol, plastid	36.21	41.18
CDX74966	Canola	cytosol	38.62	41.18
CDY07583	Canola	cytosol	34.48	41.15
Bra003142.1-P	Field mustard	cytosol, plastid	35.17	40.96
EER90630	Sorghum	plastid	30.0	40.85
CDY52751	Canola	cytosol	35.17	40.8
Bra007008.1-P	Field mustard	cytosol, plastid	35.52	40.39
AT3G53530.2	Thale cress	cytosol, plastid	34.48	40.32
CDX73547	Canola	cytosol, plastid	35.17	40.32
TraesCS5B01G488200.1	Wheat	plastid	29.31	40.28
TraesCS5A01G475200.1	Wheat	plastid	28.97	40.19
KRH34745	Soybean	endoplasmic reticulum	10.69	38.27
KRH48431	Soybean	cytosol	16.9	36.3
KRH10507	Soybean	plastid	21.03	35.67
KRH60302	Soybean	cytosol, extracellular	16.21	35.61
KRH58299	Soybean	mitochondrion	20.34	35.54
KRH41596	Soybean	cytosol	15.86	34.85
KRH42188	Soybean	cytosol, plastid	20.0	34.52
KRG92037	Soybean	cytosol	14.48	34.15
KRH39252	Soybean	cytosol	15.86	34.07
KRH43920	Soybean	cytosol	19.31	33.53
KRH71640	Soybean	cytosol, mitochondrion, plastid	12.41	27.69
KRH33278	Soybean	cytosol	12.41	27.69
Zm00001d038419_P001	Maize	cytosol	18.97	24.23

Protein Annotations

EntrezGene:100810015	Gene3D:3.30.70.100	MapMan:35.1	EMBL:ACUP02002068	EnsemblPlantsGene:GLYMA_03G174100	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810
GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0030001	GO:GO:0046872	GO:GO:0046914
GO:GO:0046916	InterPro:HMA_dom	InterPro:HMA_dom_sf	UniProt:I1JPF2	InterPro:IPR006121	ProteinID:KRH67577.1
EnsemblPlants:KRH67578	ProteinID:KRH67578	ProteinID:KRH67578.1	PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814
PANTHER:PTHR22814:SF82	SUPFAM:SSF55008	UniParc:UPI000233A913	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:-:38793198..38795656

Molecular Weight (calculated)

31477.3 Da

IEP (calculated)

10.350

GRAVY (calculated)

-0.567

Length

290 amino acids

Sequence
(BLAST)

001: MKGIDIFCAS QASTAICLGM DQPSSSSSIS ISNTAQFGGR AIDRHNPIIT DPRRTPSRDL ISPCSSSLSP IDPKPLHDHL QKAKKNSTSK PSGQKKKNAS
101: KGHDQKKKSA AGKLTEHITN NYSSKPIDSI LRRSWARPPS DLITPPGSSR YLLGDTPSFD CVSSVYDPVL ALTNVEKEKA QVIHHDETNH SSKPSSSTLP
201: KTDSSDQVVE LRVSLHCKGC EGKVRKHLSR MRGVRSFNID FAAKKVTVVG DVTPLSVLAS ISKVKNAQFW PEHASVIGSA TPETKRTNFI

Best Arabidopsis Sequence Match ( AT2G37390.2 )
(BLAST)

001: MKGRMFCASQ ASTAICSSMD HVHKSTTTDE DERNSGRAID RHNPIIKDGR RSFADDFIKL PTSAEDGEMS NKKLEIYKGR RSITGRRSTG GGGGGGAAAL
101: LKLITNDIGL ARKSFSCVAR PACDLIKTPV GSTRYLLGSD PDSITGSVDQ DPAKTVEAEA PAGEDKTLTE KKTTCGDTDQ VVVLKVSLHC RGCEGKVRKH
201: LARMQGVTSF NIDFAAKKVT VTGDITPLEI LDSISKVKNA QFWTNPTIPK PNVETQNP

Arabidopsis Description

NAKR2Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q58FZ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.