CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22990	Soybean	cytosol	55.68	77.44
KRH29875	Soybean	plastid	71.89	55.42
KRH25010	Soybean	plastid	70.81	54.58
VIT_06s0004g04030.t01	Wine grape	plastid	49.19	38.72
KRH58299	Soybean	mitochondrion	32.43	36.14
KRH34745	Soybean	endoplasmic reticulum	15.68	35.8
KRH42188	Soybean	cytosol, plastid	32.43	35.71
KRH41596	Soybean	cytosol	24.86	34.85
KRH60302	Soybean	cytosol, extracellular	24.32	34.09
KRH48431	Soybean	cytosol	24.86	34.07
KRH10507	Soybean	plastid	31.35	33.92
KRH43920	Soybean	cytosol	29.73	32.93
KRH39252	Soybean	cytosol	23.24	31.85
Bra035681.1-P	Field mustard	plastid	43.78	30.57
CDY31723	Canola	plastid	43.78	30.57
CDX77196	Canola	plastid	43.78	30.57
AT2G28660.1	Thale cress	plastid	43.24	30.19
KRH19750	Soybean	plastid	43.78	29.35
KRH32346	Soybean	plastid	44.32	29.29
KRH67578	Soybean	plastid	44.32	28.28
KRG95861	Soybean	plastid	43.78	27.93
KRH33278	Soybean	cytosol	19.46	27.69
KRH71640	Soybean	cytosol, mitochondrion, plastid	19.46	27.69
KRG92037	Soybean	cytosol	17.84	26.83

Protein Annotations

EntrezGene:100797154	Gene3D:3.30.70.100	MapMan:35.1	EMBL:ACUP02009133	EnsemblPlantsGene:GLYMA_15G042200	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810
GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0030001	GO:GO:0046872	GO:GO:0046914
GO:GO:0046916	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121	UniProt:K7M9I7	EnsemblPlants:KRH10325
ProteinID:KRH10325	ProteinID:KRH10325.1	PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF82
SUPFAM:SSF55008	UniParc:UPI000233B613	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr15:-:3303675..3304994

Molecular Weight (calculated)

20160.4 Da

IEP (calculated)

11.036

GRAVY (calculated)

-0.319

Length

185 amino acids

Sequence
(BLAST)

001: MKGMNLFCSS ISSTAVTSST TDHHSTVRRS TKRHAGIPRK SQLRVPCSSR LLPINPKPQN GDVRRTGSIQ VNNLYDSSST RYLLGDWVSE SDKIPSNSHK
101: TTLQNQVVVL RVSLHCKACA RKVTKHISKM EGVTSFSIDM EAKKVTIIGH VTPLGVLASV SKVKNAQLWP SSTSSLPSLS SSMPM

Best Arabidopsis Sequence Match ( AT5G02600.1 )
(BLAST)

001: MLCASQASTT TLCSTMDQTS QPSSSSSATI RLGGRAIDRH NPIIRDGRRL TPPPSPNLNP SSSSSSTYHT PLMTRLGLES SEQKRLAKRK SKKGDSDVGK
101: SPVSCFSSDT PQGSSRYLLS NPVFFDGFVD SDPIPIPIDE PEITKADDLN NFHEDRLIIN ASKYLSTSAS FLEKKQPDFF EGFLDYEPVL SPDNPFSEPT
201: KASPTASLSS LEDKDVSSPD FKFSPPPPPP PSPPQSSPPS PPEKNSSSDQ VVVLRVSLHC KGCAGKVKKH LSKLKGVTSY NIDFAAKKVT VTGDVTPLTV
301: LASISKVKNA QFWPEIIQK

Arabidopsis Description

NAKR1Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LDS4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.