CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 2
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH43920	Soybean	cytosol	87.72	89.82
KRH58299	Soybean	mitochondrion	66.08	68.07
KRH42188	Soybean	cytosol, plastid	65.5	66.67
VIT_12s0055g00930.t01	Wine grape	plastid	54.39	55.69
PGSC0003DMT400032793	Potato	plastid	52.05	52.98
GSMUA_Achr10P...	Banana	cytosol	50.29	52.76
Solyc01g105000.2.1	Tomato	mitochondrion, plastid	52.63	50.56
GSMUA_Achr5P04340_001	Banana	cytosol	44.44	48.72
GSMUA_Achr7P17730_001	Banana	cytosol, endoplasmic reticulum, plastid	33.92	43.61
TraesCS1A01G283600.1	Wheat	cytosol	46.2	42.47
TraesCS1B01G292800.1	Wheat	cytosol	45.61	41.94
TraesCS1D01G282700.1	Wheat	mitochondrion	45.03	41.4
HORVU1Hr1G072500.1	Barley	mitochondrion	45.61	40.62
Os08t0405700-01	Rice	mitochondrion	46.2	38.54
KXG25122	Sorghum	mitochondrion	47.37	38.39
KRH34745	Soybean	endoplasmic reticulum	16.37	34.57
KRH22990	Soybean	cytosol	24.56	31.58
KRH10325	Soybean	plastid	33.92	31.35
KRH48431	Soybean	cytosol	23.98	30.37
Zm00001d050277_P001	Maize	mitochondrion	33.33	30.0
KRH60302	Soybean	cytosol, extracellular	22.81	29.55
KRH41596	Soybean	cytosol	22.22	28.79
KRH39252	Soybean	cytosol	22.22	28.15
KRH71640	Soybean	cytosol, mitochondrion, plastid	19.3	25.38
KRH33278	Soybean	cytosol	19.3	25.38
KRH29875	Soybean	plastid	33.33	23.75
KRG92037	Soybean	cytosol	16.96	23.58
KRH25010	Soybean	plastid	32.16	22.92
KRH19750	Soybean	plastid	36.26	22.46
KRH32346	Soybean	plastid	35.09	21.43
KRG95861	Soybean	plastid	36.26	21.38
KRH67578	Soybean	plastid	35.67	21.03

Protein Annotations

EntrezGene:100814406	Gene3D:3.30.70.100	MapMan:35.1	EMBL:ACUP02009146	EnsemblPlantsGene:GLYMA_15G051900	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810
GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0030001	GO:GO:0046872	GO:GO:0046914
GO:GO:0046916	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121	UniProt:K7M9P9	EnsemblPlants:KRH10507
ProteinID:KRH10507	ProteinID:KRH10507.1	PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF80
SUPFAM:SSF55008	UniParc:UPI0002968966	:	:	:	:

Description

hypothetical protein

Coordinates

chr15:+:4089702..4091531

Molecular Weight (calculated)

19072.0 Da

IEP (calculated)

10.617

GRAVY (calculated)

-0.449

Length

171 amino acids

Sequence
(BLAST)

001: MSLKSSKRRM RNGFMCHSEA STAVCIAGSV VVPRTRSRRH QRSVSLDGTR LINYAKYSKL VDSSTSSRFN SAHKKCDSDS VSVPNIKHQE NESRELQKKP
101: TDNVFQVVVM RVAIHCQGCA GKVKKHLSKM EGVTSFSVDV ESKRVTVMGH ISPVGVLESI SKVKRAEFWD C

Best Arabidopsis Sequence Match ( AT2G28660.1 )
(BLAST)

001: MRFSDIFCSS PASTAVRHST LHHDGNVTGG RRSFQSHLRS QNPSKKKDKT VPCFSSEMPL IPIPRHLSCR NSFESPSGFR PKIASARGSD VQIRRKSSAD
101: VSDLRRSRSS LLSSSSRYLL KDHKSLKGDD KDLWLSSDRS KDLILYRDRN VTSSASSSSS SSSSSFSSSV TNVSSPAPST DDQVVVLRVS IHCKGCEGKV
201: RKHISKMEGV TSYTIDLATK KVTVVGKITP VGLVESISKV KFAQLWPSSS SPPFPHIPNY SLLKS

Arabidopsis Description

At2g28660 [Source:UniProtKB/TrEMBL;Acc:Q7XZS3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.