Factsheet for TraesCS1B01G292800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G282700.1	Wheat	mitochondrion	98.39	98.39
TraesCS1A01G283600.1	Wheat	cytosol	96.24	96.24
HORVU1Hr1G072500.1	Barley	mitochondrion	94.09	91.15
Os08t0405700-01	Rice	mitochondrion	83.33	75.61
KXG25122	Sorghum	mitochondrion	79.57	70.14
GSMUA_Achr10P...	Banana	cytosol	55.91	63.8
GSMUA_Achr5P04340_001	Banana	cytosol	48.92	58.33
Zm00001d050277_P001	Maize	mitochondrion	58.06	56.84
VIT_12s0055g00930.t01	Wine grape	plastid	48.39	53.89
GSMUA_Achr7P17730_001	Banana	cytosol, endoplasmic reticulum, plastid	37.63	52.63
KRH10507	Soybean	plastid	41.94	45.61
KRH43920	Soybean	cytosol	40.32	44.91
KRH58299	Soybean	mitochondrion	39.78	44.58
KRH42188	Soybean	cytosol, plastid	39.25	43.45
PGSC0003DMT400032793	Potato	plastid	38.71	42.86
Solyc01g105000.2.1	Tomato	mitochondrion, plastid	38.71	40.45
TraesCS3B01G322900.1	Wheat	cytosol	30.65	39.86
TraesCS7B01G247000.1	Wheat	cytosol	16.13	38.96
TraesCS1B01G371000.1	Wheat	cytosol, mitochondrion	26.88	34.25
TraesCS3B01G244200.1	Wheat	mitochondrion	21.51	31.01
TraesCS7B01G338200.1	Wheat	cytosol	15.05	26.17
TraesCS5B01G488200.1	Wheat	plastid	29.03	25.59
TraesCS3B01G593700.1	Wheat	plastid	32.26	19.54

Protein Annotations

EnsemblPlants:TraesCS1B01G292800.1	EnsemblPlantsGene:TraesCS1B01G292800	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488	GO:GO:0006810
GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121
PANTHER:PTHR22814	PANTHER:PTHR22814:SF80	PFAM:PF00403	PFscan:PS50846	SEG:seg	SUPFAM:SSF55008
TIGR:cd00371	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr1B:+:510598857..510602192

Molecular Weight (calculated)

19532.0 Da

IEP (calculated)

11.250

GRAVY (calculated)

-0.101

Length

186 amino acids

Sequence
(BLAST)

001: MRTGGMLCRS QAATAVCVPG DARSMVVGRR SDRTIAEDAR TLHDVRYVRL GGDGAGAARV SSRRVAPPQP PPMPRRRGAP VAVTLPMVTK SPVETPARDT
101: AAAKRTSATP TAAVAPGDQV LQVVVMKVAI HCQGCAGKVR KHISKMEGVT SFSIDLESKK VTVMGHVSPA GVLESVSKVK KAELLM

Best Arabidopsis Sequence Match ( AT2G28660.1 )
(BLAST)

001: MRFSDIFCSS PASTAVRHST LHHDGNVTGG RRSFQSHLRS QNPSKKKDKT VPCFSSEMPL IPIPRHLSCR NSFESPSGFR PKIASARGSD VQIRRKSSAD
101: VSDLRRSRSS LLSSSSRYLL KDHKSLKGDD KDLWLSSDRS KDLILYRDRN VTSSASSSSS SSSSSFSSSV TNVSSPAPST DDQVVVLRVS IHCKGCEGKV
201: RKHISKMEGV TSYTIDLATK KVTVVGKITP VGLVESISKV KFAQLWPSSS SPPFPHIPNY SLLKS

Arabidopsis Description

At2g28660 [Source:UniProtKB/TrEMBL;Acc:Q7XZS3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.