Subcellular Localization
min:
: max
Winner_takes_all: cytosol, mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G352100.1 | Wheat | mitochondrion | 95.21 | 93.92 |
| HORVU1Hr1G080800.1 | Barley | mitochondrion | 89.73 | 86.18 |
| KXG22404 | Sorghum | extracellular | 62.33 | 61.49 |
| Os05t0534500-01 | Rice | cytosol, mitochondrion | 66.44 | 60.62 |
| VIT_11s0016g04220.t01 | Wine grape | cytosol | 52.74 | 57.46 |
| TraesCS3B01G322900.1 | Wheat | cytosol | 56.16 | 57.34 |
| GSMUA_Achr1P14500_001 | Banana | cytosol | 50.68 | 54.81 |
| AT3G24450.1 | Thale cress | cytosol | 50.0 | 52.14 |
| KRH48431 | Soybean | cytosol | 47.95 | 51.85 |
| CDX94814 | Canola | cytosol | 49.32 | 51.43 |
| Bra001948.1-P | Field mustard | cytosol | 49.32 | 51.43 |
| KRH41596 | Soybean | cytosol | 45.89 | 50.76 |
| KRH60302 | Soybean | cytosol, extracellular | 45.89 | 50.76 |
| KRH39252 | Soybean | cytosol | 45.21 | 48.89 |
| GSMUA_Achr8P26110_001 | Banana | cytosol | 48.63 | 45.22 |
| PGSC0003DMT400001032 | Potato | cytosol | 45.89 | 44.97 |
| CDY69094 | Canola | cytosol | 34.25 | 44.64 |
| TraesCS7B01G247000.1 | Wheat | cytosol | 23.29 | 44.16 |
| TraesCS3B01G244200.1 | Wheat | mitochondrion | 37.67 | 42.64 |
| TraesCS1B01G292800.1 | Wheat | cytosol | 34.25 | 26.88 |
| TraesCS7B01G338200.1 | Wheat | cytosol | 18.49 | 25.23 |
| TraesCS5B01G488200.1 | Wheat | plastid | 35.62 | 24.64 |
| TraesCS3B01G593700.1 | Wheat | plastid | 42.47 | 20.2 |
Protein Annotations
| Gene3D:3.30.70.100 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 | PFAM:PF00403 |
| PFscan:PS50846 | PFscan:PS51257 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF101 | SUPFAM:SSF55008 | SignalP:SignalP-noTM |
| EnsemblPlantsGene:TraesCS1B01G371000 | EnsemblPlants:TraesCS1B01G371000.1 | TIGR:cd00371 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr1B:-:600884603..600886181
Molecular Weight (calculated)
16028.8 Da
IEP (calculated)
8.997
GRAVY (calculated)
0.036
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVRRRLWRM GGRVLDCFAA CVGAGAGCGC LCARTLGDEV EERKALVTGS SQVVRLSDLV VEGTSSSRTL GFHLQPKTVE LRVSMHCYGC AKKVHKHISK
101: MEGVTWFEVD LERKKVVVTG DVTPLEVLQS VSKVKLAQLW MPPQPC
101: MEGVTWFEVD LERKKVVVTG DVTPLEVLQS VSKVKLAQLW MPPQPC
001: MGKLQKIGRV WDCLFLPTNQ CSCFCLNTLG DEEEEFEKEP LIDSSTEKSG KVMRLKDVVA ADHRQTLAFH LKPKIVELKV SMHCYGCAKK VEKHISKLDG
101: VTWYKVELES KKVVVKGNIL PVDVLESICK VKNAQLWSSP
101: VTWYKVELES KKVVVKGNIL PVDVLESICK VKNAQLWSSP
Arabidopsis Description
Heavy metal transport/detoxification superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LHF4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.