Factsheet for Bra001948.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 2
vacuole 2
plastid 1
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid, vacuole
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX94814	Canola	cytosol	98.57	98.57
AT3G24450.1	Thale cress	cytosol	92.86	92.86
CDY69094	Canola	cytosol	70.71	88.39
KRH60302	Soybean	cytosol, extracellular	57.14	60.61
KRH48431	Soybean	cytosol	57.86	60.0
VIT_11s0016g04220.t01	Wine grape	cytosol	57.14	59.7
KRH39252	Soybean	cytosol	55.0	57.04
KRH41596	Soybean	cytosol	53.57	56.82
GSMUA_Achr1P14500_001	Banana	cytosol	50.0	51.85
Os01t0719600-01	Rice	cytosol	52.14	51.41
PGSC0003DMT400001032	Potato	cytosol	52.86	49.66
TraesCS1B01G371000.1	Wheat	cytosol, mitochondrion	51.43	49.32
EES01377	Sorghum	cytosol	51.43	48.65
KXG22404	Sorghum	extracellular	50.71	47.97
TraesCS1A01G352100.1	Wheat	mitochondrion	49.29	46.62
Os05t0534500-01	Rice	cytosol, mitochondrion	52.86	46.25
TraesCS3A01G288300.1	Wheat	cytosol	46.43	45.45
HORVU3Hr1G068200.1	Barley	cytosol	46.43	45.45
TraesCS3B01G322900.1	Wheat	cytosol	46.43	45.45
Zm00001d011731_P001	Maize	extracellular	47.86	45.27
TraesCS3D01G288100.1	Wheat	cytosol	45.71	44.76
Zm00001d043615_P001	Maize	cytosol	50.0	44.59
GSMUA_Achr8P26110_001	Banana	cytosol	49.29	43.95
HORVU1Hr1G080800.1	Barley	mitochondrion	47.14	43.42
Bra029854.1-P	Field mustard	cytosol, plastid	17.86	32.89
Bra007230.1-P	Field mustard	cytosol, plastid	17.14	22.64
Bra003234.1-P	Field mustard	cytosol, plastid	16.43	18.11
Bra035681.1-P	Field mustard	plastid	32.14	16.98
Bra017191.1-P	Field mustard	cytosol	31.43	16.6
Bra007008.1-P	Field mustard	cytosol, plastid	28.57	15.69
Bra003142.1-P	Field mustard	cytosol, plastid	27.14	15.26
Bra005201.1-P	Field mustard	cytosol	29.29	15.24
Bra014702.1-P	Field mustard	cytosol	16.43	13.94
Bra028868.1-P	Field mustard	cytosol, plastid	28.57	13.84
Bra009578.1-P	Field mustard	cytosol, plastid	29.29	12.46

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.2	EnsemblPlantsGene:Bra001948	EnsemblPlants:Bra001948.1	EnsemblPlants:Bra001948.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0006810	GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom
InterPro:HMA_dom_sf	InterPro:IPR006121	UniProt:M4CCL8	PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814
PANTHER:PTHR22814:SF101	SUPFAM:SSF55008	UniParc:UPI0002540818	SEG:seg	:	:

Description

AT3G24450 (E=7e-067) | copper-binding family protein

Coordinates

chrA03:-:19519409..19520888

Molecular Weight (calculated)

15939.4 Da

IEP (calculated)

8.282

GRAVY (calculated)

-0.332

Length

140 amino acids

Sequence
(BLAST)

001: MGKLQKIGRA WDCLFYPTNQ CSCFCLNTLE NDDEEFEKEP LIDSSSEKSG KVMRLKDVVS ADHRQTLAFH LKPKIVELKV SMHCYGCAKK VEKHISKLDG
101: VTWYKVELES KKVVVKGNIM PVDVLESICK VKNAQLWSSS

Best Arabidopsis Sequence Match ( AT3G24450.1 )
(BLAST)

001: MGKLQKIGRV WDCLFLPTNQ CSCFCLNTLG DEEEEFEKEP LIDSSTEKSG KVMRLKDVVA ADHRQTLAFH LKPKIVELKV SMHCYGCAKK VEKHISKLDG
101: VTWYKVELES KKVVVKGNIL PVDVLESICK VKNAQLWSSP

Arabidopsis Description

Heavy metal transport/detoxification superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LHF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.