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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • cytosol 2
  • mitochondrion 5
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1A01G352100.1 Wheat mitochondrion 88.16 90.54
TraesCS1B01G371000.1 Wheat cytosol, mitochondrion 86.18 89.73
KXG22404 Sorghum extracellular 58.55 60.14
Os05t0534500-01 Rice cytosol, mitochondrion 61.84 58.75
HORVU3Hr1G068200.1 Barley cytosol 54.61 58.04
GSMUA_Achr1P14500_001 Banana cytosol 50.0 56.3
VIT_11s0016g04220.t01 Wine grape cytosol 48.03 54.48
AT3G24450.1 Thale cress cytosol 46.05 50.0
KRH48431 Soybean cytosol 43.42 48.89
KRH60302 Soybean cytosol, extracellular 42.11 48.48
KRH41596 Soybean cytosol 42.11 48.48
Bra001948.1-P Field mustard cytosol 43.42 47.14
CDX94814 Canola cytosol 43.42 47.14
GSMUA_Achr8P26110_001 Banana cytosol 48.03 46.5
KRH39252 Soybean cytosol 40.79 45.93
PGSC0003DMT400001032 Potato cytosol 43.42 44.3
CDY69094 Canola cytosol 28.95 39.29
HORVU7Hr1G100230.1 Barley cytosol 21.05 28.57
HORVU5Hr1G112560.1 Barley plastid 34.87 25.6
HORVU1Hr1G072500.1 Barley mitochondrion 30.92 24.48
HORVU7Hr1G082540.3 Barley cytosol, plastid 11.84 22.22
HORVU3Hr1G114920.1 Barley cytosol 38.82 16.43
Protein Annotations
Gene3D:3.30.70.100MapMan:35.1GO:GO:0003674GO:GO:0005488GO:GO:0006810GO:GO:0008150
GO:GO:0030001GO:GO:0046872InterPro:HMA_domInterPro:HMA_dom_sfEnsemblPlantsGene:HORVU1Hr1G080800EnsemblPlants:HORVU1Hr1G080800.1
InterPro:IPR006121UniProt:M0WMV0PFAM:PF00403PFscan:PS50846PFscan:PS51257PANTHER:PTHR22814
PANTHER:PTHR22814:SF101SUPFAM:SSF55008SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0002961F9CSEG:seg
Description
No Description!
Coordinates
chrchr1H:-:526284585..526286754
Molecular Weight (calculated)
16391.3 Da
IEP (calculated)
9.518
GRAVY (calculated)
0.100
Length
152 amino acids
Sequence
(BLAST)
001: MAMKRRLWRR MGGSVLGCFA ACVGAGAGAG CGCLCARALE EVVEERKALV SGSSQVVRLT DLLVGKGSSS SSSTTLGFHL QPKTVELRVS MHCYGCAKKV
101: HKHISKMEGV TWFEVDLERK KVVVTGDVTP LEVLQSVSKV KLAQLWMPPQ PC
Best Arabidopsis Sequence Match ( AT3G24450.1 )
(BLAST)
001: MGKLQKIGRV WDCLFLPTNQ CSCFCLNTLG DEEEEFEKEP LIDSSTEKSG KVMRLKDVVA ADHRQTLAFH LKPKIVELKV SMHCYGCAKK VEKHISKLDG
101: VTWYKVELES KKVVVKGNIL PVDVLESICK VKNAQLWSSP
Arabidopsis Description
Heavy metal transport/detoxification superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LHF4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.