CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plasma membrane 3
cytosol 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	plasma membrane
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH60302	Soybean	cytosol, extracellular	93.94	93.94
KRH48431	Soybean	cytosol	80.3	78.52
KRH39252	Soybean	cytosol	77.27	75.56
VIT_11s0016g04220.t01	Wine grape	cytosol	68.94	67.91
GSMUA_Achr1P14500_001	Banana	cytosol	55.3	54.07
Bra001948.1-P	Field mustard	cytosol	56.82	53.57
AT3G24450.1	Thale cress	cytosol	56.82	53.57
CDX94814	Canola	cytosol	56.06	52.86
PGSC0003DMT400001032	Potato	cytosol	59.09	52.35
TraesCS3A01G288300.1	Wheat	cytosol	56.06	51.75
EES01377	Sorghum	cytosol	57.58	51.35
TraesCS3D01G288100.1	Wheat	cytosol	55.3	51.05
TraesCS3B01G322900.1	Wheat	cytosol	55.3	51.05
Os01t0719600-01	Rice	cytosol	54.55	50.7
HORVU3Hr1G068200.1	Barley	cytosol	54.55	50.35
Zm00001d011731_P001	Maize	extracellular	55.3	49.32
KXG22404	Sorghum	extracellular	55.3	49.32
CDY69094	Canola	cytosol	40.15	47.32
Zm00001d043615_P001	Maize	cytosol	55.3	46.5
TraesCS1B01G371000.1	Wheat	cytosol, mitochondrion	50.76	45.89
GSMUA_Achr8P26110_001	Banana	cytosol	54.55	45.86
TraesCS1A01G352100.1	Wheat	mitochondrion	49.24	43.92
Os05t0534500-01	Rice	cytosol, mitochondrion	53.03	43.75
HORVU1Hr1G080800.1	Barley	mitochondrion	48.48	42.11
KRH34745	Soybean	endoplasmic reticulum	21.21	34.57
KRH22990	Soybean	cytosol	30.3	30.08
KRH10325	Soybean	plastid	34.85	24.86
KRG92037	Soybean	cytosol	22.73	24.39
KRH58299	Soybean	mitochondrion	30.3	24.1
KRH42188	Soybean	cytosol, plastid	30.3	23.81
KRH43920	Soybean	cytosol	29.55	23.35
KRH71640	Soybean	cytosol, mitochondrion, plastid	22.73	23.08
KRH33278	Soybean	cytosol	22.73	23.08
KRH10507	Soybean	plastid	28.79	22.22
KRH29875	Soybean	plastid	37.12	20.42
KRH25010	Soybean	plastid	36.36	20.0
KRH32346	Soybean	plastid	35.61	16.79
KRG95861	Soybean	plastid	35.61	16.21
KRH19750	Soybean	plastid	33.33	15.94
KRH67578	Soybean	plastid	34.85	15.86

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.1	EMBL:ACUP02004772	EnsemblPlantsGene:GLYMA_08G039700	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0008150
GO:GO:0009987	GO:GO:0019725	GO:GO:0030001	GO:GO:0046872	GO:GO:0046914	GO:GO:0046916
InterPro:HMA_dom	InterPro:HMA_dom_sf	UniProt:I1KQ38	InterPro:IPR006121	EnsemblPlants:KRH41596	ProteinID:KRH41596
ProteinID:KRH41596.1	PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF101	SUPFAM:SSF55008
UniParc:UPI00023C6260	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:3128489..3130909

Molecular Weight (calculated)

14861.3 Da

IEP (calculated)

7.312

GRAVY (calculated)

-0.004

Length

132 amino acids

Sequence
(BLAST)

001: MGNLSWMLDK FCISSCSKTC FCVNSMEFED EFESKALIAS DSDHKLRLKD VVDGKQTLAF QLKPKIVILR VSMHCHGCAK RVEKHISKLE GVSSYKVDLE
101: TKMVMICGDI LPLEVLESVS KVKTAELWNS PC

Best Arabidopsis Sequence Match ( AT3G24450.1 )
(BLAST)

001: MGKLQKIGRV WDCLFLPTNQ CSCFCLNTLG DEEEEFEKEP LIDSSTEKSG KVMRLKDVVA ADHRQTLAFH LKPKIVELKV SMHCYGCAKK VEKHISKLDG
101: VTWYKVELES KKVVVKGNIL PVDVLESICK VKNAQLWSSP

Arabidopsis Description

Heavy metal transport/detoxification superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LHF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.