CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

nucleus 2
plasma membrane 3
cytosol 2
extracellular 3
endoplasmic reticulum 2
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	plasma membrane
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41596	Soybean	cytosol	93.94	93.94
KRH48431	Soybean	cytosol	84.85	82.96
KRH39252	Soybean	cytosol	82.58	80.74
VIT_11s0016g04220.t01	Wine grape	cytosol	71.21	70.15
Bra001948.1-P	Field mustard	cytosol	60.61	57.14
AT3G24450.1	Thale cress	cytosol	60.61	57.14
CDX94814	Canola	cytosol	59.85	56.43
PGSC0003DMT400001032	Potato	cytosol	62.88	55.7
GSMUA_Achr1P14500_001	Banana	cytosol	56.06	54.81
TraesCS3A01G288300.1	Wheat	cytosol	58.33	53.85
TraesCS3D01G288100.1	Wheat	cytosol	57.58	53.15
TraesCS3B01G322900.1	Wheat	cytosol	57.58	53.15
Os01t0719600-01	Rice	cytosol	56.82	52.82
EES01377	Sorghum	cytosol	59.09	52.7
HORVU3Hr1G068200.1	Barley	cytosol	56.82	52.45
Zm00001d011731_P001	Maize	extracellular	56.06	50.0
CDY69094	Canola	cytosol	41.67	49.11
KXG22404	Sorghum	extracellular	54.55	48.65
GSMUA_Achr8P26110_001	Banana	cytosol	56.82	47.77
Zm00001d043615_P001	Maize	cytosol	56.82	47.77
TraesCS1B01G371000.1	Wheat	cytosol, mitochondrion	50.76	45.89
TraesCS1A01G352100.1	Wheat	mitochondrion	49.24	43.92
Os05t0534500-01	Rice	cytosol, mitochondrion	53.03	43.75
HORVU1Hr1G080800.1	Barley	mitochondrion	48.48	42.11
KRH34745	Soybean	endoplasmic reticulum	22.73	37.04
KRH22990	Soybean	cytosol	29.55	29.32
KRG92037	Soybean	cytosol	24.24	26.02
KRH58299	Soybean	mitochondrion	31.06	24.7
KRH42188	Soybean	cytosol, plastid	31.06	24.4
KRH10325	Soybean	plastid	34.09	24.32
KRH43920	Soybean	cytosol	30.3	23.95
KRH71640	Soybean	cytosol, mitochondrion, plastid	23.48	23.85
KRH33278	Soybean	cytosol	23.48	23.85
KRH10507	Soybean	plastid	29.55	22.81
KRH29875	Soybean	plastid	35.61	19.58
KRH25010	Soybean	plastid	35.61	19.58
KRH32346	Soybean	plastid	36.36	17.14
KRG95861	Soybean	plastid	36.36	16.55
KRH19750	Soybean	plastid	34.09	16.3
KRH67578	Soybean	plastid	35.61	16.21

Protein Annotations

EntrezGene:100816650	Gene3D:3.30.70.100	MapMan:35.1	EMBL:ACUP02003358	EnsemblPlantsGene:GLYMA_05G232300	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810
GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0030001	GO:GO:0046872	GO:GO:0046914
GO:GO:0046916	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121	UniProt:K7KRM2	ProteinID:KRH60301.1
EnsemblPlants:KRH60302	ProteinID:KRH60302	ProteinID:KRH60302.1	ProteinID:KRH60303.1	PFAM:PF00403	PFscan:PS50846
PANTHER:PTHR22814	PANTHER:PTHR22814:SF101	SUPFAM:SSF55008	UniParc:UPI000233A9F3	:	:

Description

hypothetical protein

Coordinates

chr5:+:40978699..40981751

Molecular Weight (calculated)

14827.1 Da

IEP (calculated)

7.706

GRAVY (calculated)

-0.070

Length

132 amino acids

Sequence
(BLAST)

001: MGKLSWMLDK FCISSCSNTC FCVNSMEFED EFESKPLIAS DSDHKLRLKD VVNGKQTLAF QLKPKIVILR VSMHCHGCAK RVEKHISKLE GVSSYKVDLE
101: TKMVVVCGDI LPSEVLESVS KVKNAELWNS PC

Best Arabidopsis Sequence Match ( AT3G24450.1 )
(BLAST)

001: MGKLQKIGRV WDCLFLPTNQ CSCFCLNTLG DEEEEFEKEP LIDSSTEKSG KVMRLKDVVA ADHRQTLAFH LKPKIVELKV SMHCYGCAKK VEKHISKLDG
101: VTWYKVELES KKVVVKGNIL PVDVLESICK VKNAQLWSSP

Arabidopsis Description

Heavy metal transport/detoxification superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LHF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.