CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
mitochondrion 1
cytosol 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH10507	Soybean	plastid	89.82	87.72
KRH58299	Soybean	mitochondrion	61.68	62.05
KRH42188	Soybean	cytosol, plastid	61.68	61.31
VIT_12s0055g00930.t01	Wine grape	plastid	52.69	52.69
PGSC0003DMT400032793	Potato	plastid	50.3	50.0
GSMUA_Achr10P...	Banana	cytosol	48.5	49.69
Solyc01g105000.2.1	Tomato	mitochondrion, plastid	49.1	46.07
GSMUA_Achr5P04340_001	Banana	cytosol	42.52	45.51
GSMUA_Achr7P17730_001	Banana	cytosol, endoplasmic reticulum, plastid	32.93	41.35
TraesCS1A01G283600.1	Wheat	cytosol	45.51	40.86
TraesCS1B01G292800.1	Wheat	cytosol	44.91	40.32
TraesCS1D01G282700.1	Wheat	mitochondrion	44.31	39.78
HORVU1Hr1G072500.1	Barley	mitochondrion	44.91	39.06
Os08t0405700-01	Rice	mitochondrion	46.11	37.56
KXG25122	Sorghum	mitochondrion	46.71	36.97
KRH34745	Soybean	endoplasmic reticulum	17.37	35.8
KRH48431	Soybean	cytosol	24.55	30.37
KRH60302	Soybean	cytosol, extracellular	23.95	30.3
KRH22990	Soybean	cytosol	23.95	30.08
KRH10325	Soybean	plastid	32.93	29.73
KRH41596	Soybean	cytosol	23.35	29.55
Zm00001d050277_P001	Maize	mitochondrion	32.93	28.95
KRH39252	Soybean	cytosol	22.75	28.15
KRH71640	Soybean	cytosol, mitochondrion, plastid	20.36	26.15
KRH33278	Soybean	cytosol	20.36	26.15
KRG92037	Soybean	cytosol	17.96	24.39
KRH29875	Soybean	plastid	31.74	22.08
KRH25010	Soybean	plastid	30.54	21.25
KRH19750	Soybean	plastid	33.53	20.29
KRG95861	Soybean	plastid	34.13	19.66
KRH67578	Soybean	plastid	33.53	19.31
KRH32346	Soybean	plastid	32.34	19.29

Protein Annotations

EntrezGene:102661113	Gene3D:3.30.70.100	MapMan:35.1	EMBL:ACUP02004903	EnsemblPlantsGene:GLYMA_08G180500	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810
GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0030001	GO:GO:0046872	GO:GO:0046914
GO:GO:0046916	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121	UniProt:K7L7E8	EnsemblPlants:KRH43920
ProteinID:KRH43920	ProteinID:KRH43920.1	PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF80
SUPFAM:SSF55008	UniParc:UPI00023C5E12	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:14457268..14458952

Molecular Weight (calculated)

18791.6 Da

IEP (calculated)

10.477

GRAVY (calculated)

-0.457

Length

167 amino acids

Sequence
(BLAST)

001: MRNGFMCHSE ASTTVCMRSC DTITGSVVVP RTRSRRHQRS VSLDDTRLIK YAKYSKLVDS STSSRLFNSA HKKGDSVSVP NIKHQENESR ELQKKPTDYV
101: FQVVVMRVAI HCQGCASKVK RHLSKMEGVT SFSVDVESKR VTVKGHISPV GVLESISKVK RAEFWNC

Best Arabidopsis Sequence Match ( AT5G02600.1 )
(BLAST)

001: MLCASQASTT TLCSTMDQTS QPSSSSSATI RLGGRAIDRH NPIIRDGRRL TPPPSPNLNP SSSSSSTYHT PLMTRLGLES SEQKRLAKRK SKKGDSDVGK
101: SPVSCFSSDT PQGSSRYLLS NPVFFDGFVD SDPIPIPIDE PEITKADDLN NFHEDRLIIN ASKYLSTSAS FLEKKQPDFF EGFLDYEPVL SPDNPFSEPT
201: KASPTASLSS LEDKDVSSPD FKFSPPPPPP PSPPQSSPPS PPEKNSSSDQ VVVLRVSLHC KGCAGKVKKH LSKLKGVTSY NIDFAAKKVT VTGDVTPLTV
301: LASISKVKNA QFWPEIIQK

Arabidopsis Description

NAKR1Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LDS4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.