Factsheet for HORVU1Hr1G072500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G292800.1	Wheat	cytosol	91.15	94.09
TraesCS1D01G282700.1	Wheat	mitochondrion	90.62	93.55
TraesCS1A01G283600.1	Wheat	cytosol	90.62	93.55
Os08t0405700-01	Rice	mitochondrion	82.81	77.56
KXG25122	Sorghum	mitochondrion	79.69	72.51
GSMUA_Achr10P...	Banana	cytosol	54.17	63.8
Zm00001d050277_P001	Maize	mitochondrion	58.85	59.47
GSMUA_Achr5P04340_001	Banana	cytosol	47.4	58.33
VIT_12s0055g00930.t01	Wine grape	plastid	47.4	54.49
GSMUA_Achr7P17730_001	Banana	cytosol, endoplasmic reticulum, plastid	35.42	51.13
KRH10507	Soybean	plastid	40.62	45.61
KRH58299	Soybean	mitochondrion	39.06	45.18
KRH43920	Soybean	cytosol	39.06	44.91
KRH42188	Soybean	cytosol, plastid	38.54	44.05
PGSC0003DMT400032793	Potato	plastid	38.54	44.05
Solyc01g105000.2.1	Tomato	mitochondrion, plastid	38.02	41.01
HORVU3Hr1G068200.1	Barley	cytosol	29.17	39.16
HORVU1Hr1G080800.1	Barley	mitochondrion	24.48	30.92
HORVU7Hr1G100230.1	Barley	cytosol	17.71	30.36
HORVU5Hr1G112560.1	Barley	plastid	28.65	26.57
HORVU7Hr1G082540.3	Barley	cytosol, plastid	8.33	19.75
HORVU3Hr1G114920.1	Barley	cytosol	31.25	16.71

Protein Annotations

EnsemblPlants:HORVU1Hr1G072500.1	EnsemblPlantsGene:HORVU1Hr1G072500	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488	GO:GO:0006810
GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121
PANTHER:PTHR22814	PANTHER:PTHR22814:SF80	PFAM:PF00403	PFscan:PS50846	SEG:seg	SUPFAM:SSF55008
UniParc:UPI0002966C66	UniProt:M0X910	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:498024404..498028438

Molecular Weight (calculated)

19917.6 Da

IEP (calculated)

11.112

GRAVY (calculated)

-0.004

Length

192 amino acids

Sequence
(BLAST)

001: MRAGGMLCRS QAATAVCVPG DARSMVVGRR ADRATIAEDA RVLHDVRYVR LGGAGAGCDG PGATRVSSRR VAPPPPPPMP RRRGAPVAVT LPMVTKSPVE
101: TPARDTAAAK RAPAAPTAAV APGDQILQVV VMKVAIHCQG CAGKVRKHIS KMEGVTSFSI DLESKKVTVM GHVSPAGVLE SISKVKKAEL LM

Best Arabidopsis Sequence Match ( AT2G28660.1 )
(BLAST)

001: MRFSDIFCSS PASTAVRHST LHHDGNVTGG RRSFQSHLRS QNPSKKKDKT VPCFSSEMPL IPIPRHLSCR NSFESPSGFR PKIASARGSD VQIRRKSSAD
101: VSDLRRSRSS LLSSSSRYLL KDHKSLKGDD KDLWLSSDRS KDLILYRDRN VTSSASSSSS SSSSSFSSSV TNVSSPAPST DDQVVVLRVS IHCKGCEGKV
201: RKHISKMEGV TSYTIDLATK KVTVVGKITP VGLVESISKV KFAQLWPSSS SPPFPHIPNY SLLKS

Arabidopsis Description

At2g28660 [Source:UniProtKB/TrEMBL;Acc:Q7XZS3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.