CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

nucleus 2
plastid 2
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH58299	Soybean	mitochondrion	92.86	93.98
KRH10507	Soybean	plastid	66.67	65.5
KRH43920	Soybean	cytosol	61.31	61.68
PGSC0003DMT400032793	Potato	plastid	58.93	58.93
Solyc01g105000.2.1	Tomato	mitochondrion, plastid	58.93	55.62
VIT_12s0055g00930.t01	Wine grape	plastid	52.38	52.69
GSMUA_Achr5P04340_001	Banana	cytosol	45.83	49.36
GSMUA_Achr10P...	Banana	cytosol	47.62	49.08
GSMUA_Achr7P17730_001	Banana	cytosol, endoplasmic reticulum, plastid	33.93	42.86
TraesCS1A01G283600.1	Wheat	cytosol	44.05	39.78
TraesCS1B01G292800.1	Wheat	cytosol	43.45	39.25
TraesCS1D01G282700.1	Wheat	mitochondrion	43.45	39.25
HORVU1Hr1G072500.1	Barley	mitochondrion	44.05	38.54
Os08t0405700-01	Rice	mitochondrion	44.05	36.1
KRH34745	Soybean	endoplasmic reticulum	17.26	35.8
KXG25122	Sorghum	mitochondrion	44.64	35.55
KRH48431	Soybean	cytosol	26.19	32.59
KRH10325	Soybean	plastid	35.71	32.43
KRH22990	Soybean	cytosol	25.6	32.33
KRH60302	Soybean	cytosol, extracellular	24.4	31.06
KRH39252	Soybean	cytosol	24.4	30.37
KRH41596	Soybean	cytosol	23.81	30.3
Zm00001d050277_P001	Maize	mitochondrion	32.74	28.95
KRH71640	Soybean	cytosol, mitochondrion, plastid	20.83	26.92
KRH33278	Soybean	cytosol	20.83	26.92
KRG92037	Soybean	cytosol	19.05	26.02
KRH29875	Soybean	plastid	32.14	22.5
KRH19750	Soybean	plastid	36.9	22.46
KRH25010	Soybean	plastid	30.95	21.67
KRH32346	Soybean	plastid	34.52	20.71
KRG95861	Soybean	plastid	35.12	20.34
KRH67578	Soybean	plastid	34.52	20.0

Protein Annotations

EntrezGene:100785162	Gene3D:3.30.70.100	MapMan:35.1	EMBL:ACUP02004791	EnsemblPlantsGene:GLYMA_08G074300	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810
GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0030001	GO:GO:0046872	GO:GO:0046914
GO:GO:0046916	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121	UniProt:K7L5F3	EnsemblPlants:KRH42188
ProteinID:KRH42188	ProteinID:KRH42188.1	PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF80
SUPFAM:SSF55008	UniParc:UPI000296F3ED	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:5670059..5672358

Molecular Weight (calculated)

19144.5 Da

IEP (calculated)

10.635

GRAVY (calculated)

-0.507

Length

168 amino acids

Sequence
(BLAST)

001: MTSLKSSERK MMKRGFMCHS RASTAVCMST RDPRSVVVPK KLERRVFLDD TRLINYAKYS KLVEPPRSSP VPKIKLRGQE QDQANNEPRE FQKKQTDNNV
101: FQVVVMRVAI HCQGCAGKVK KHLSKMEGVT SFSIDVESKR VTVMGHISPV EVLESISKVK RAEFWTAC

Best Arabidopsis Sequence Match ( AT2G37390.2 )
(BLAST)

001: MKGRMFCASQ ASTAICSSMD HVHKSTTTDE DERNSGRAID RHNPIIKDGR RSFADDFIKL PTSAEDGEMS NKKLEIYKGR RSITGRRSTG GGGGGGAAAL
101: LKLITNDIGL ARKSFSCVAR PACDLIKTPV GSTRYLLGSD PDSITGSVDQ DPAKTVEAEA PAGEDKTLTE KKTTCGDTDQ VVVLKVSLHC RGCEGKVRKH
201: LARMQGVTSF NIDFAAKKVT VTGDITPLEI LDSISKVKNA QFWTNPTIPK PNVETQNP

Arabidopsis Description

NAKR2Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q58FZ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.