Factsheet for TraesCS1D01G282700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G292800.1	Wheat	cytosol	98.39	98.39
TraesCS1A01G283600.1	Wheat	cytosol	95.7	95.7
HORVU1Hr1G072500.1	Barley	mitochondrion	93.55	90.62
Os08t0405700-01	Rice	mitochondrion	82.8	75.12
KXG25122	Sorghum	mitochondrion	79.03	69.67
GSMUA_Achr10P...	Banana	cytosol	54.84	62.58
GSMUA_Achr5P04340_001	Banana	cytosol	48.39	57.69
Zm00001d050277_P001	Maize	mitochondrion	56.99	55.79
VIT_12s0055g00930.t01	Wine grape	plastid	47.31	52.69
GSMUA_Achr7P17730_001	Banana	cytosol, endoplasmic reticulum, plastid	37.1	51.88
KRH10507	Soybean	plastid	41.4	45.03
KRH58299	Soybean	mitochondrion	39.78	44.58
KRH43920	Soybean	cytosol	39.78	44.31
PGSC0003DMT400032793	Potato	plastid	39.25	43.45
KRH42188	Soybean	cytosol, plastid	39.25	43.45
TraesCS3D01G288100.1	Wheat	cytosol	31.18	40.56
Solyc01g105000.2.1	Tomato	mitochondrion, plastid	38.71	40.45
TraesCS7D01G342900.1	Wheat	cytosol	16.13	38.96
TraesCS7D01G429000.1	Wheat	cytosol	18.82	32.11
TraesCS3D01G216100.1	Wheat	cytosol	21.51	26.49
TraesCS3D01G531500.1	Wheat	mitochondrion, plastid	32.8	20.13

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0006810	GO:GO:0008150
GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121	PFAM:PF00403
PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF80	SUPFAM:SSF55008	EnsemblPlantsGene:TraesCS1D01G282700	EnsemblPlants:TraesCS1D01G282700.1
TIGR:cd00371	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1D:+:380769157..380773060

Molecular Weight (calculated)

19502.0 Da

IEP (calculated)

11.117

GRAVY (calculated)

-0.081

Length

186 amino acids

Sequence
(BLAST)

001: MRTGGMLCRS QAATAVCVPG DARSMVVGRR ADRTIAEDAR TLHDVRYVRL GGDGAGAARV SSRQVAPPQP PPMPRRRGAP VAVTLPMVTK SPVETPARDT
101: AAAKRTSATP TAAVAPGEQV LQVVVMKVAI HCQGCAGKVR KHISKMEGVT SFSIDLESKK VTVMGHVSPA GVLESVSKVK KAELLM

Best Arabidopsis Sequence Match ( AT2G28660.1 )
(BLAST)

001: MRFSDIFCSS PASTAVRHST LHHDGNVTGG RRSFQSHLRS QNPSKKKDKT VPCFSSEMPL IPIPRHLSCR NSFESPSGFR PKIASARGSD VQIRRKSSAD
101: VSDLRRSRSS LLSSSSRYLL KDHKSLKGDD KDLWLSSDRS KDLILYRDRN VTSSASSSSS SSSSSFSSSV TNVSSPAPST DDQVVVLRVS IHCKGCEGKV
201: RKHISKMEGV TSYTIDLATK KVTVVGKITP VGLVESISKV KFAQLWPSSS SPPFPHIPNY SLLKS

Arabidopsis Description

At2g28660 [Source:UniProtKB/TrEMBL;Acc:Q7XZS3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.