Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 3
- nucleus 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH71640 | Soybean | cytosol, mitochondrion, plastid | 81.54 | 81.54 |
| KRH34745 | Soybean | endoplasmic reticulum | 44.62 | 71.6 |
| GSMUA_Achr10P... | Banana | cytosol | 18.46 | 66.67 |
| TraesCS7D01G429000.1 | Wheat | cytosol | 51.54 | 61.47 |
| TraesCS7A01G439300.1 | Wheat | cytosol | 50.77 | 60.0 |
| HORVU7Hr1G100230.1 | Barley | cytosol | 50.0 | 58.04 |
| Zm00001d016691_P001 | Maize | extracellular | 50.0 | 58.04 |
| GSMUA_Achr6P17300_001 | Banana | cytosol | 48.46 | 57.8 |
| TraesCS7B01G338200.1 | Wheat | cytosol | 46.92 | 57.01 |
| EES06905 | Sorghum | cytosol | 49.23 | 56.64 |
| KRG92037 | Soybean | cytosol | 43.85 | 46.34 |
| KRH22990 | Soybean | cytosol | 26.15 | 25.56 |
| KRH48431 | Soybean | cytosol | 24.62 | 23.7 |
| KRH60302 | Soybean | cytosol, extracellular | 23.85 | 23.48 |
| KRH41596 | Soybean | cytosol | 23.08 | 22.73 |
| KRH39252 | Soybean | cytosol | 22.31 | 21.48 |
| KRH58299 | Soybean | mitochondrion | 26.92 | 21.08 |
| KRH42188 | Soybean | cytosol, plastid | 26.92 | 20.83 |
| KRH43920 | Soybean | cytosol | 26.15 | 20.36 |
| KRH10325 | Soybean | plastid | 27.69 | 19.46 |
| KRH10507 | Soybean | plastid | 25.38 | 19.3 |
| KRH25010 | Soybean | plastid | 26.15 | 14.17 |
| KRH29875 | Soybean | plastid | 25.38 | 13.75 |
| KRH32346 | Soybean | plastid | 27.69 | 12.86 |
| KRH19750 | Soybean | plastid | 26.92 | 12.68 |
| KRH67578 | Soybean | plastid | 27.69 | 12.41 |
| KRG95861 | Soybean | plastid | 27.69 | 12.41 |
Protein Annotations
| EntrezGene:100305622 | MapMan:25.5.2.3 | Gene3D:3.30.70.100 | EMBL:ACUP02006440 | EMBL:BT089322 | UniProt:C6SVX9 |
| EnsemblPlantsGene:GLYMA_10G112000 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 | GO:GO:0030001 |
| GO:GO:0046872 | GO:GO:0046914 | GO:GO:0046916 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 |
| EnsemblPlants:KRH33278 | ProteinID:KRH33278 | ProteinID:KRH33278.1 | PFAM:PF00403 | PFscan:PS50846 | PANTHER:PTHR22814 |
| PANTHER:PTHR22814:SF271 | SUPFAM:SSF55008 | UniParc:UPI0001B1591E | : | : | : |
Description
hypothetical protein
Coordinates
chr10:+:26763875..26767833
Molecular Weight (calculated)
13639.8 Da
IEP (calculated)
4.360
GRAVY (calculated)
-0.548
Length
130 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSQTVVLKV GMSCQGCAGA VNRVLEKMEG VESFDIDLKE QKVTVKGNVQ PDEVLQAVSK SGKKTAFWVD EAQPPENKPS ETAPVTSAEN DNKASESGPV
101: ASENKPPEAA HVASADPETK PSETAVETVA
101: ASENKPPEAA HVASADPETK PSETAVETVA
001: MAQTVVLKVG MSCQGCVGAV NRVLGKMEGV ESFDIDIKEQ KVTVKGNVEP EAVFQTVSKT GKKTSYWPVE AEAEPKAEAD PKVETVTETK TEAETKTEAK
101: VDAKADVEPK AAEAETKPSQ V
101: VDAKADVEPK AAEAETKPSQ V
Arabidopsis Description
CCHCopper transport protein CCH [Source:UniProtKB/Swiss-Prot;Acc:O82089]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.