CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH10325	Soybean	plastid	77.44	55.68
KRH25010	Soybean	plastid	64.66	35.83
KRH29875	Soybean	plastid	64.66	35.83
KRH34745	Soybean	endoplasmic reticulum	20.3	33.33
VIT_06s0004g04030.t01	Wine grape	plastid	54.14	30.64
KRH48431	Soybean	cytosol	30.83	30.37
KRH41596	Soybean	cytosol	30.08	30.3
KRH60302	Soybean	cytosol, extracellular	29.32	29.55
KRH39252	Soybean	cytosol	28.57	28.15
KRH33278	Soybean	cytosol	25.56	26.15
KRH71640	Soybean	cytosol, mitochondrion, plastid	25.56	26.15
KRH58299	Soybean	mitochondrion	32.33	25.9
KRH42188	Soybean	cytosol, plastid	32.33	25.6
KRH10507	Soybean	plastid	31.58	24.56
KRH43920	Soybean	cytosol	30.08	23.95
KRG92037	Soybean	cytosol	21.8	23.58
CDY31723	Canola	plastid	45.11	22.64
CDX77196	Canola	plastid	45.11	22.64
Bra035681.1-P	Field mustard	plastid	45.11	22.64
AT2G28660.1	Thale cress	plastid	42.11	21.13
KRH32346	Soybean	plastid	43.61	20.71
KRH19750	Soybean	plastid	42.86	20.65
KRG95861	Soybean	plastid	42.86	19.66
KRH67578	Soybean	plastid	41.35	18.97

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.1	EMBL:ACUP02008450	EnsemblPlantsGene:GLYMA_13G332000	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0008150
GO:GO:0009987	GO:GO:0019725	GO:GO:0030001	GO:GO:0046872	GO:GO:0046914	GO:GO:0046916
InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121	UniProt:K7M3A9	EnsemblPlants:KRH22990	ProteinID:KRH22990
ProteinID:KRH22990.1	PFAM:PF00403	PANTHER:PTHR22814	PANTHER:PTHR22814:SF82	SUPFAM:SSF55008	UniParc:UPI000296A923
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:42653571..42654755

Molecular Weight (calculated)

14685.8 Da

IEP (calculated)

10.625

GRAVY (calculated)

-0.219

Length

133 amino acids

Sequence
(BLAST)

001: MPNGNAQNSR IECKDQQSSN FRRVIIYLIY LLSDWVSESD KIPSHSHKPT LQNQIVVLRV SLHCKARAGK VTKHISKMEG VTSFSIDMEA KKVTIIGHVT
101: PLGVLASVSK VKNAQLWPSS TSSLPSLSSS MPR

Best Arabidopsis Sequence Match ( AT5G02600.1 )
(BLAST)

001: MLCASQASTT TLCSTMDQTS QPSSSSSATI RLGGRAIDRH NPIIRDGRRL TPPPSPNLNP SSSSSSTYHT PLMTRLGLES SEQKRLAKRK SKKGDSDVGK
101: SPVSCFSSDT PQGSSRYLLS NPVFFDGFVD SDPIPIPIDE PEITKADDLN NFHEDRLIIN ASKYLSTSAS FLEKKQPDFF EGFLDYEPVL SPDNPFSEPT
201: KASPTASLSS LEDKDVSSPD FKFSPPPPPP PSPPQSSPPS PPEKNSSSDQ VVVLRVSLHC KGCAGKVKKH LSKLKGVTSY NIDFAAKKVT VTGDVTPLTV
301: LASISKVKNA QFWPEIIQK

Arabidopsis Description

NAKR1Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LDS4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.