Factsheet for Bra035681.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31723	Canola	plastid	98.49	98.49
CDX77196	Canola	plastid	97.74	97.74
AT2G28660.1	Thale cress	plastid	78.87	78.87
KRH22990	Soybean	cytosol	22.64	45.11
KRH10325	Soybean	plastid	30.57	43.78
Bra029854.1-P	Field mustard	cytosol, plastid	12.45	43.42
KRH25010	Soybean	plastid	37.36	41.25
KRH29875	Soybean	plastid	36.98	40.83
VIT_06s0004g04030.t01	Wine grape	plastid	33.58	37.87
Bra001948.1-P	Field mustard	cytosol	16.98	32.14
Bra007230.1-P	Field mustard	cytosol, plastid	12.83	32.08
Bra003142.1-P	Field mustard	cytosol, plastid	29.81	31.73
Bra007008.1-P	Field mustard	cytosol, plastid	28.68	29.8
Bra017191.1-P	Field mustard	cytosol	27.92	27.92
Bra005201.1-P	Field mustard	cytosol	27.17	26.77
Bra003234.1-P	Field mustard	cytosol, plastid	12.45	25.98
Bra028868.1-P	Field mustard	cytosol, plastid	27.55	25.26
Bra009578.1-P	Field mustard	cytosol, plastid	29.06	23.4
Bra014702.1-P	Field mustard	cytosol	12.45	20.0

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.2	EnsemblPlantsGene:Bra035681	EnsemblPlants:Bra035681.1	EnsemblPlants:Bra035681.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0006810	GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom
InterPro:HMA_dom_sf	InterPro:IPR006121	UniProt:M4F3N1	InterPro:NAKR2/3	PFAM:PF00403	PIRSF:PIRSF011221
PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF82	SUPFAM:SSF55008	UniParc:UPI000254403B	SEG:seg

Description

AT2G28660 (E=8e-072) | copper-binding family protein

Coordinates

chrA04:+:12874742..12876243

Molecular Weight (calculated)

28987.0 Da

IEP (calculated)

10.644

GRAVY (calculated)

-0.640

Length

265 amino acids

Sequence
(BLAST)

001: MRISDIFCSS PASTAVRRST LPHDGEITGG RRSVDSLRRS QNHNNNRDKT APCFASEMPF IPIPRPVMSC RNSFESSRGR KITTAHGGEV QTRRKSSADV
101: SDVLRRTRSS LQGSSSSRYL LKDHKSYKED DKDLWLSSSD RSKDLIPFRD RNVTISSSST SSSSSSSVTN GSSPSPSTDD DQVVVLRVSI HCKGCEGKVR
201: KHISKMEGVT SYTIDIATKK VTVVGKVTPS GVVESISKVK FAQLWPSSSS PSFPHVPNHS PLIKS

Best Arabidopsis Sequence Match ( AT2G28660.1 )
(BLAST)

001: MRFSDIFCSS PASTAVRHST LHHDGNVTGG RRSFQSHLRS QNPSKKKDKT VPCFSSEMPL IPIPRHLSCR NSFESPSGFR PKIASARGSD VQIRRKSSAD
101: VSDLRRSRSS LLSSSSRYLL KDHKSLKGDD KDLWLSSDRS KDLILYRDRN VTSSASSSSS SSSSSFSSSV TNVSSPAPST DDQVVVLRVS IHCKGCEGKV
201: RKHISKMEGV TSYTIDLATK KVTVVGKITP VGLVESISKV KFAQLWPSSS SPPFPHIPNY SLLKS

Arabidopsis Description

At2g28660 [Source:UniProtKB/TrEMBL;Acc:Q7XZS3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.